| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2548 |
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| Symbol | |
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| ID | 4081463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2685998 |
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| End bp | 2687224 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010925 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_617587 |
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| Protein GI | 103488026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA TCTTTGCGAC CCTGCTCGCG ATACTCCCGG CCGCTGCGCT GGCGGAGCCG
CTCAGCTTCG ACGAGGCTCT TCTCCGCGCA GCGAACAGCG CGCCGTTGCT AGAAGCGCGC
GGAGAGCAAG TCCGCGCCCG GCAGTCAGCC GCAATCGCGG CCGGGCAGTT GCCCGACCCC
AGGCTCGGGA TCGGCCTCGA CAACTTCCCG GTATCGGGGC CACCCGCCTT CAGCCTCAGC
CAAGAGAACA TGACGATGGC GCGTGTGGGG ATCGAGCAGG AGGTGCCGAA CCTTGCCAAG
CGGCACGCCC AGCAGAACCG GGCGGAGGCG GACATTACGG TAGCCCGGGC AAGGAGCGAT
GTGGACCTTC GCCGGATCAG GGTCGCCACC GCGCTTGCGT GGATCGATGC CTATTATGCG
CAGAAGCGCC TGGAGGCGAT GGACGCGATA TTGGAGCGCC TGCGGCGTCT GCCCGGCGTC
GCGGTCTCGG CGGTGGCGGC GGGAACGGGG CGGCCGGCGC AGAGCCTCAA CATCCGCCAA
TCGATTGCCG AGCTGTTCGA GGACCGCCGC AGCATGCTTG TCGCCGAAGC GGCCAAGGCG
CGCGCCGAAT TGGCGCGGTG GACGGGTGAC CCCGACCCGC AACCCACCGG CCCGGCGCCG
CATTTCGCAG TGTCGCGCGA AGCGTTGAGA GCGGCGCTCG CCCGTCACCC GGAGCTTGTC
ATGGCGGCCG CCACTGTCGA CCAGGCCCTG GCGGACGTAG ATGCCGCTCG AGCGGAAAAG
CGGCCAGACT GGGGGTTCAA CGTCGCCTTT CAACGCCGTG ATCCGCAATT CGGGAACATG
GTGTCGGTGG GCGCCACGAT GACGCTGCCG CTTTTCCCCG GCCGCCGGCA GAATCCCCGC
ATCGAGGCGG CCGCCGCGGA AGCCGCCGCG GCACGCGCCG AACAGGAAGA CGCGCTCCGG
GCCCTGGAAG CGGAACTCGA CGCGGGCCTT GCCGAGCATG CCATGCATCA CGAGCAATGG
ATGCGCTCGC GCGAGACGCT GCTGCCGCTC GCCCGGCGGG AAGCCGAACT CGAAACGGCA
AGCTATGCCG CCGGGCGCGC CGGGCTGCTC GACGTGATCG AAGCCGAGGC GAGCCTCGCC
CGGACAGAAC TCGACGCACT CGACCGCGAG GCTGCTGTAG CCCGGCACGA AGCGCGCCTG
ACGTTGACCT ACGGAGACGA TCGATGA
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| Protein sequence | MRFIFATLLA ILPAAALAEP LSFDEALLRA ANSAPLLEAR GEQVRARQSA AIAAGQLPDP
RLGIGLDNFP VSGPPAFSLS QENMTMARVG IEQEVPNLAK RHAQQNRAEA DITVARARSD
VDLRRIRVAT ALAWIDAYYA QKRLEAMDAI LERLRRLPGV AVSAVAAGTG RPAQSLNIRQ
SIAELFEDRR SMLVAEAAKA RAELARWTGD PDPQPTGPAP HFAVSREALR AALARHPELV
MAAATVDQAL ADVDAARAEK RPDWGFNVAF QRRDPQFGNM VSVGATMTLP LFPGRRQNPR
IEAAAAEAAA ARAEQEDALR ALEAELDAGL AEHAMHHEQW MRSRETLLPL ARREAELETA
SYAAGRAGLL DVIEAEASLA RTELDALDRE AAVARHEARL TLTYGDDR
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