| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2541 |
|---|
| Symbol | |
|---|
| ID | 4081456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2680425 |
|---|
| End bp | 2680778 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010918 |
|---|
| Product | ArsR family transcriptional regulator |
|---|
| Protein accession | YP_617580 |
|---|
| Protein GI | 103488019 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.101096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGA AGAACGCCGC CGCCGCCCTG TCCGCCCTCG GTCACACGGG TCGTCTTTCG
ATATTCCGCC TGCTCGTTCA GGCTGGCCGC GAGGGCGTCG CCGCCGGCGA GATCGCGCGC
CGGCTCGCTG TGCCGCCGAA CACGCTCTCA TCCAACCTCA ACATCCTTTC GAATGTCGGC
CTGATCGACA GCCGCCGCGA AGGGCGGTCG ATCATCTACA CCGCCCGCTA TGAGAACATG
ACCGCGCTGC TCGAATATCT GATGGAGGAT TGCTGCAACG GCGCGCCGGA AATCTGCGCG
CCGCTCGCGG ATGTGGCACT CAAGAGCCGC TGTGGAAAGG AAGGACGCGC ATGA
|
|---|
| Protein sequence | MELKNAAAAL SALGHTGRLS IFRLLVQAGR EGVAAGEIAR RLAVPPNTLS SNLNILSNVG
LIDSRREGRS IIYTARYENM TALLEYLMED CCNGAPEICA PLADVALKSR CGKEGRA
|
|---|
| |