| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2537 |
|---|
| Symbol | |
|---|
| ID | 4081511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2677602 |
|---|
| End bp | 2678345 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010914 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_617576 |
|---|
| Protein GI | 103488015 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | [TIGR02690] arsenical resistance protein ArsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGC ATACGCTTCC CCACCCTGAC CATCTGCCCC ATCTCGATCC GCGTTTCGCC
CACGAGCACC CGGCCTTCGG GCTCGGAGCG ATCACGCCGC CGCCGCGCAT CCTGCTGCTC
TACGGCAGCT TGCGCGAGCG TTCCTATTCG CGCCTCGCGG TTGAGGAGGC GGCACGGCTG
CTGCGCTTCT TCGGCGCCGA GACGCGTATC TTCGATCCCA AGGATCTACC GCTGCCCGAT
CAGGTCGCGG GAGACGATCA CCCGGCGGTC CACGAACTGC GCGAGCACGC GATGTGGTCC
GAAGGCATGG TCTGGTGCAG CCCGGAGCGG CACGGCCAGA TCACCGGCAT CATGAAGACG
CAGATCGATC ATCTCCCTCT TGAAATGAAG GGACTTCGCC CGACCCAGGG CCGGACGCTG
GCGGTGATGC AGGTGTCGGG TGGATCGCAG TCATTCAACG CGGTCAACAC GCTGCGCTTG
CTCGGCCGCT GGATGCGGAT GTTCACCATT CCCAACCAGT CGAGCGTGGC CAAGGCGTTC
CAGGAGTTCG ACGAGGCGGG GCGCATGAAG CCGTCGAGCT ATTATGACCG GATCGTGGAT
GTGATGGAGG AGCTGGTCCG GTTCACCGTA CTGCTGCGGC CGCACGCCGA GCAACTCGTC
GACCGCTATT CCGAGCGCAA GTCTGCGGGC ATCGTCATCG ACCCGGCCAA GGATTTGTCG
AGCATCGCTG TTTGCCAGCG CTGA
|
|---|
| Protein sequence | MSLHTLPHPD HLPHLDPRFA HEHPAFGLGA ITPPPRILLL YGSLRERSYS RLAVEEAARL
LRFFGAETRI FDPKDLPLPD QVAGDDHPAV HELREHAMWS EGMVWCSPER HGQITGIMKT
QIDHLPLEMK GLRPTQGRTL AVMQVSGGSQ SFNAVNTLRL LGRWMRMFTI PNQSSVAKAF
QEFDEAGRMK PSSYYDRIVD VMEELVRFTV LLRPHAEQLV DRYSERKSAG IVIDPAKDLS
SIAVCQR
|
|---|
| |