Gene Sala_2535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2535 
Symbol 
ID4081509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2674866 
End bp2676257 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID638010913 
Productphage integrase 
Protein accessionYP_617575 
Protein GI103488014 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGG GCACCATTCT TCTGACCAAA CGAGTCATCG ACGCGGCCGT TTCAAAAGGG 
AAGCGCTACG ACATCTGGGA TAGCGAGATT CCCGGTTTCG GTCTCCGGGT GGGCGTGAGC
GGGACAAAAA CGTTCGTGCT CCGATACCGC GCTGAGGGCG GTGGACGCGG GGCGCCGAAG
CGGCACGTCA CGGTCGGACG CTTTGGTCCC CTCACTGTCG AGATGGCCCG GCGACAGGCC
AAGCAGCTCC TGGCCAAGGC AACCGTTGGC GAGGATCCGG CCAAGGCGCG AAACGACAAG
CGCGGCGAGA TGCGGATCAG CGAACTGATC GATCTCTATG AGAAGCAGGG CTGCTATATC
CAGCGCGGGA AACGGCAGGG CGTGCCCATG AAGCCGCGGA CCAAGCAATA TACGCTTGCA
CGGCTGCGCC ATCATGTCGT CCCACTACTC GGCAATCGCC GTGTAACCGA AGTCAACACA
GGCGACATCG AGCGCTTCTT CCGTGACGTA GAGACTGGAA AGACGGCGCG GGACGACAAG
ATCGGCCCGC GCAAGCGCAT TGTCGTGCGA GGCGGCGAAG GCGCCGCGCG CAAGGTATTT
CGAGACCTGT CCGCCGTATT CAGTTTCGCG CGGCGCAGCG AGATCGTCAC CCGCAACCCT
TGCGAGACTG CGGCGGTCAA GAAAACCGAC AACCACAAGG AACGCTTCCT CACGCTCGAG
GAGGTCAAGC GCTTCGGCGA AGGCCTGCGC GAGCTGGAGA AGGACGGAAC CAACCGCAAG
GCGCTCGACA TCATGCGCTT GTGGATGCTG ACAGGATGCC GCCGCGAGGA GATTGCGAGC
CTCAAATGGC AGGAGGTCGA TTTCGAGCAT GGCTGCCTGC GTTTCGGAGA TAGCAAGACA
GGCAAAGCGG TGCGGCCGAT CGGTGCCGCT GCGATCGCCG TGATCAAGAC AATCGAGCAG
ACTGGGGATT CCGAGTTCGT TTTTCCCGCT GGGGAAGGTG ATAGCTATTT CCGAGGCTAC
AAGACGCCGT GGAAGAAGGT CGTCGAGAAG GCTCGGCTAC CCGGCGTGAC GCCGCATACC
TTACGGCATA CGATGGGTTC GACGGCGATT TCGTCCGGCG AAGCGATGGC ATTCACTGGG
GCGATCCTGG GACATACCAA TCCGCGATCA ACGGCCATCT ATGCGCACGT CCAGCACAGC
CCGGCCCGGC GCGCCGCCGA TCGCGTAGCA GAACGGATCG CCGCAGCGCT TGCCGGCATG
AGTGACTTGG AAGTCGATGC CCCGGCTCCC GACGAGGATG AGGAGCTACT CCGCAGAGTG
GCCGAAACGC TGATGAAGGG CGGCGCGGAA GCCGACCGCC TGCGGGTCGT CATCAACGCG
CTCGCACCCT GA
 
Protein sequence
MVQGTILLTK RVIDAAVSKG KRYDIWDSEI PGFGLRVGVS GTKTFVLRYR AEGGGRGAPK 
RHVTVGRFGP LTVEMARRQA KQLLAKATVG EDPAKARNDK RGEMRISELI DLYEKQGCYI
QRGKRQGVPM KPRTKQYTLA RLRHHVVPLL GNRRVTEVNT GDIERFFRDV ETGKTARDDK
IGPRKRIVVR GGEGAARKVF RDLSAVFSFA RRSEIVTRNP CETAAVKKTD NHKERFLTLE
EVKRFGEGLR ELEKDGTNRK ALDIMRLWML TGCRREEIAS LKWQEVDFEH GCLRFGDSKT
GKAVRPIGAA AIAVIKTIEQ TGDSEFVFPA GEGDSYFRGY KTPWKKVVEK ARLPGVTPHT
LRHTMGSTAI SSGEAMAFTG AILGHTNPRS TAIYAHVQHS PARRAADRVA ERIAAALAGM
SDLEVDAPAP DEDEELLRRV AETLMKGGAE ADRLRVVINA LAP