| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2517 |
|---|
| Symbol | |
|---|
| ID | 4081628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2652821 |
|---|
| End bp | 2653873 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617557 |
|---|
| Protein GI | 103487996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.925497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTC CAGCCCGTGA ATTGGCGCGC CGCCTCGCCG ACAATGCCGA AGCCGTCTGC
CGCCACTATC TCCCCAACGG CCGCCGCGAA GGCCGCTACT GGCTTGTCGG CGATGTCCGG
GGGACGCCCG GTCGCAGCCT TTACCTGTTG CTGTCGTCGT CGGGCGACGG GCGCGGCCGG
GCGGGGAAAT GGACCGATGC CGCGAGCGGC GAGCATGGCG ACCTGCTCGA TGTCATCGCC
GCCAGTTGCG GTCACGCCGA ATTGCGCGAG ACGCTCGCCG AGGCGCGGCG ATTTTTGAGC
ATGCCGATGT CGATGCCGCA GCCGGCGGGG TCTCGATCGC CGCGATCGCG CAAGGCGTCG
ACGGGAACGC CTGCGGCGGC GCGGCGGCTT TGGGATGGGT CGAAGCCGAT CGCCGGGACG
TTGGCCGCTG CTTATCTTGC ATCGCGTGGG ATCGATATCG ACCCAGGCAA TGGTGCCATC
CGCTTTCATC CGCGCTGCCA TTACCGGGCA TCAAGCGATG ACCCGCCCGA TGTCCGTCCC
GCCTGGCCGG CCATGATCGC TGCGGTAACC GATGACGCCG GTCAAATCTC CGGCGTTCAT
CGCACCTGGC TCGATCCGGC GAGCGGCAAG GCGCCCGTCG CCTGTCCCCG CCGCGCGATG
GGGAATCTGC TTGGGCATGG CGTGCGGTTC GGACCTGCTG CGGACGTCAT GGCCGCTGGC
GAAGGTATCG AGACGCTCCT GTCGCTACGC GAGCTGATGC CGGACATGCC GATGATCGCC
GGTCTGTCGG CGGCGCATCT CGCCGCCATC CACTTCCCCC AACCGCTGCG CCGTCTCTAT
GTTGCGCGCG ACAATGACGC GGCCGGGTCC TGGGCGATGA AGACCTTGAT TGAGCGCGCC
GAACCGCTCG GGATCGCGAT CGTCCCGCTC GATCCGCGGC TCGACGATTT AAACAGCGAT
CTCGTTCGGA CGGGCCGGGA AGAAATGGCG GCTCGGCTTC GCGCCCTGAT GCTGCCGCTC
GATGCGGTGC GCTTCCTTGT CCGAAAAACA TAG
|
|---|
| Protein sequence | MESPARELAR RLADNAEAVC RHYLPNGRRE GRYWLVGDVR GTPGRSLYLL LSSSGDGRGR
AGKWTDAASG EHGDLLDVIA ASCGHAELRE TLAEARRFLS MPMSMPQPAG SRSPRSRKAS
TGTPAAARRL WDGSKPIAGT LAAAYLASRG IDIDPGNGAI RFHPRCHYRA SSDDPPDVRP
AWPAMIAAVT DDAGQISGVH RTWLDPASGK APVACPRRAM GNLLGHGVRF GPAADVMAAG
EGIETLLSLR ELMPDMPMIA GLSAAHLAAI HFPQPLRRLY VARDNDAAGS WAMKTLIERA
EPLGIAIVPL DPRLDDLNSD LVRTGREEMA ARLRALMLPL DAVRFLVRKT
|
|---|
| |