| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2492 |
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| Symbol | |
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| ID | 4081368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2633048 |
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| End bp | 2633776 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010870 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_617532 |
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| Protein GI | 103487971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG TGCGGCTGCG GCGAAGTCTC ACCATACTGT CTGTCCTGTG CTCGCCGATG
CGCGTCGGCG CACGGCGCGC GGCCATTTCG GCTGCGCTGC TTTTGCCGCC GATCTGCACT
CCGGCTGCCG CCGCAGCGCA GTCGGAGCGC CATCCCTATG CCGCTCCGGT CGCCGAAGCG
GCGCAGCGCT TCGGTATCCC GGAGCTCTGG ATCTGGCGCG TGATGCATGC CGAAAGCCGC
GGCCGTATCG GCGCCGTGTC GCACGCCGGC GCCATGGGGC TCATGCAGAT CATGCCCGCA
ACATGGGCGC CGCTGACGGC GCGCCACCGG CTCGGTTCGG ACCCGTTCGA CCCCCGCGCG
AACATCCTCG CGGGCGCCGC CTATCTGCGC GCGATGTGGG ACCGCTATGG CGATGTCCGG
CTGATGCTCG CGGCCTATAA TGCAGGTCCC GGCCGCGCCG ATGCCTATGT CGCGGGGCGT
CGCGGACTGC CAGCCGAGAC GCGCGCCTAT GTCGCGAAGA TTGCGCCCGA ACTGCACGCG
CCGCTTGGAA CTTCTGCCGT CGCTTCGCTT CCAAGAGGGT CGCCGGGCTG GCGCGATGCG
GCCATTTTTG TTGCACCAGC GGCGGCGATC GACACTGCGC GCCCGGCAGC TTCGGCAGGT
GAAGCTGCCG CCATCCCGGA CGCAGGTTCG CCGCTTTTCA TTGCTCGGTC CGGGCAGCAT
CGGCCATGA
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| Protein sequence | MTVVRLRRSL TILSVLCSPM RVGARRAAIS AALLLPPICT PAAAAAQSER HPYAAPVAEA
AQRFGIPELW IWRVMHAESR GRIGAVSHAG AMGLMQIMPA TWAPLTARHR LGSDPFDPRA
NILAGAAYLR AMWDRYGDVR LMLAAYNAGP GRADAYVAGR RGLPAETRAY VAKIAPELHA
PLGTSAVASL PRGSPGWRDA AIFVAPAAAI DTARPAASAG EAAAIPDAGS PLFIARSGQH
RP
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