| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2484 |
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| Symbol | |
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| ID | 4081360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2623679 |
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| End bp | 2624011 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010862 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_617524 |
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| Protein GI | 103487963 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.309797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATG CCCTCCGGCA TGGCGCCCGC CGCGCCATGC TCTGTTCGAC CGCACTTTTT
GTCGCGCTCG CGGTCTCGGC ACCCGCTCAA GCCGGCGGCT CGTCGATGCC GTGGGAAGCG
CCGCTTCAGT CGATCCTCGA AAGCATCGAG GGTCCGGTCG CGAAGATCGT CGCGGTGATC
ATCATCATCG TGACCGGCCT CAGCCTCGCC TTCGGCGACA CCTCGGGCGG GTTCCGCCGG
CTGGTCCAGA TCGTCTTCGG TCTGTCGATC GCCTTCGCCG CCTCGAGCTT CTTCCTCTCC
TTCTTCTCCT TCGGCGGTGG AGCGCTGGTT TGA
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| Protein sequence | MIHALRHGAR RAMLCSTALF VALAVSAPAQ AGGSSMPWEA PLQSILESIE GPVAKIVAVI
IIIVTGLSLA FGDTSGGFRR LVQIVFGLSI AFAASSFFLS FFSFGGGALV
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