| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2482 |
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| Symbol | |
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| ID | 4081320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2620244 |
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| End bp | 2620963 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010860 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_617522 |
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| Protein GI | 103487961 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.19296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA GCTTTTATCG CCGCACAGCG CTGGCCGGCC TGATCGCGAT CACGATGCTG
TCGGCGGGCG CAGTGATCAC CCCCGCATCG GCGCAGATCG GCGGGATCGT CCACGATCCG
CGCAACTATG CCCAGAATAT CCTGACCGCA GCGCGCACGC TCGAGCAGAT CAACAATCAG
ATCAAGCAGC TGCAGAACCA GGCGACCTCG CTCGTCAACG AGGCGCGGAA CCTGCAGAGC
TTGCCGGTCT CGACGCTGCA AGAGCTGCAG GGCCAGGTCG ACCGCACCCG CGAGCTGCTC
GGTGAAGCGC AGCGCATCGC CTTCGACGTC GGCGACATCC AGAAGACGTT CGAGGCGCGC
TATAAGGGCG CATCGCTGTC GGGGCCGCAG GCGGCGCTCG TCGTCAATGC CGAGGCGCGC
TGGAACGACA GCGTCGGCGC CTTTCAGGAC GCGATGAAGG TACAGGCCGG CGTGGTCGTC
AACATGGGAG CTGCGCGGCA GTCGATCGGC ACGCTGGTGA CCTCGAGCCA GTCGGCGACC
GGCGCGCTGC AGGCGGCTCA GGCGGGGAAC CAGCTGCTCG CGCTCCAGTC GCAGCAGCTT
GGCGACCTTG CCGCCGCGAT CGCCGCACAG GGCCGCGCCG AAATGCTCGA TGCCGCACGC
GCCGCCGCCG CGGAAGCCGA GGGCCGCGAA CGCTTCCGCC GCTTCCGCAA GGGCAATTGA
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| Protein sequence | MKTSFYRRTA LAGLIAITML SAGAVITPAS AQIGGIVHDP RNYAQNILTA ARTLEQINNQ
IKQLQNQATS LVNEARNLQS LPVSTLQELQ GQVDRTRELL GEAQRIAFDV GDIQKTFEAR
YKGASLSGPQ AALVVNAEAR WNDSVGAFQD AMKVQAGVVV NMGAARQSIG TLVTSSQSAT
GALQAAQAGN QLLALQSQQL GDLAAAIAAQ GRAEMLDAAR AAAAEAEGRE RFRRFRKGN
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