| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2478 |
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| Symbol | |
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| ID | 4081316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2617173 |
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| End bp | 2618024 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010856 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_617518 |
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| Protein GI | 103487957 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.197669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.278704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCT TTTCCCGTAT CTCGCTGCTC GCGGGTGTCG CTGCGCTCGG CGTGGCGTCG
CCATCCCTCG GGGCTGAAGG TCGCGATCCG AAACAGAATG TCGGGCGCGC CAACGACGCG
GCGCGCGTGC AGCCCGATCG CGCGACCTTC CTCAACGCGA TCCAGAAATA TGCCTGGGCC
GAGGGCGCGC TGTATCAGGT CTATGCGTCG CCGGGGCAGG TCACTGACAT CGTGCTGCAG
GAGGGCGAGG AGCTTGTCGG CCCGGGGCCG GTGGCTGCCG GCGACACGGT CCGCTGGATC
ATCGGCGACA CGGTGAGCGG CAGCGGAGCG AGTCGCCGCG TGCACATCCT CGTGAAGCCA
ACGCGGGCCG ACATCATGAC GAATATCGTC ATCAACACGA GCCGCCGGAC CTATCACATC
GAGCTGCGCG CGACGCCCGC GACCTATATG GCGTCGGTGT CCTGGTCCTA TCCGGAAGCC
GAGCTGATCG CGCTGCGTGC TGCGGAGGTG GAGCGTGAGC GGGCGGCGCC GGTCGCGGCA
GGGCTCGACC TTGGCGCCCT CAACTTTCGT TACCGGCTGT CGGGCGACAA GCCGGATTGG
CGACCGGTGC GCGTTTTCGA TGACGGGCGC CAGCTCTTCA TCGAGTTCGG CGAAGGCGTC
GCAACGGGCG ATATGCCCCC GCTGTTCGCG GTCGGTGAAA AGGGCGAGGC CGAGCTCGTC
AACTACCGCG TCCATGGCCG CTTCATGATC GCCGATCGCC TGTTCGAACG CGGACAGCTT
CGGATGGGTG CCGGACGCGC GGCGCGCGAG GTGGTTATCG AGCGCGTCGG CCGCGTGCGG
GGGCGCTCGT GA
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| Protein sequence | MKAFSRISLL AGVAALGVAS PSLGAEGRDP KQNVGRANDA ARVQPDRATF LNAIQKYAWA
EGALYQVYAS PGQVTDIVLQ EGEELVGPGP VAAGDTVRWI IGDTVSGSGA SRRVHILVKP
TRADIMTNIV INTSRRTYHI ELRATPATYM ASVSWSYPEA ELIALRAAEV ERERAAPVAA
GLDLGALNFR YRLSGDKPDW RPVRVFDDGR QLFIEFGEGV ATGDMPPLFA VGEKGEAELV
NYRVHGRFMI ADRLFERGQL RMGAGRAARE VVIERVGRVR GRS
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