| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2477 |
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| Symbol | |
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| ID | 4081315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2615962 |
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| End bp | 2617143 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010855 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_617517 |
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| Protein GI | 103487956 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.260778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.292469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTCG TCGCTGTCCC TCCCGCAAGC GGCGAGCCCT TTCGGCTTGG TGCCGAGCCG
CCGAGCGTCA TGCGCCTGTC GCGCAAGGCG CTGGCCATTC TAGGCGCCGC ATTGGGGACC
GCTATCGGCG GCGCGCTTCT CTATGCGCTG CAGCCCGCCA AGCTCAAGGT GGCCGAGAAT
CTCTACGATA GCGACCGTGC GAACAAGTCC GAGCTCGTGA CCGGAGCGCC GGGCGATTAT
GGCAAGATCC CGAAGCTCGG CGAGCCGCTC CCTGGCGATC TCGGGCGGCC GATCCTTGCC
GCGCGCGAGA ATGGCGAGAC CGTCCCGGTG CCTCCGATCG GCGCGCCTCC GCCGCCAGAC
CCGCGAGCCG CTGCGGCGGA GCAAGCCCGC GCGCGTGCGG CCCAGGAACG CGAAAGCGCG
CGCGCCAGCC AGCTCTTCCT CGGCGGTGGG GCGTCGGTCA CCTCGCAGCT GCCGGTGCTT
GGCGAAGGCG TGTTGCGACC GGCGCCCGAC AATCTGCAAG CCAACCCGAC CGCGGCCGAC
AAGCGCAAGG GCTTCCTCAG TGGTGATGGC GCCGGTCCGG CAGAGAGCAT GGCGCGGCTC
GTCCAGCCCT CATCGCCGCA TCTGGTCCAG GCGGGCAGCG TGATTCCGGC GGCACTCATC
ACCGGCATCC GGTCCGACTT GCCGGGCCAG ATCACCGCGC AGGTGACCCA GAATGTTTAC
GACAGCCCCA CCGGGCGCAT CCTGCTCATT CCGCAGGGTG CTCGGCTGAT CGGCGAATAT
GGCAGCGAGA TCGCCGACGG GCAGAGCCGG GTCCTTCTCG CATGGGACCG GCTGATCCTG
CCGGGCGGGC GCTCGATTGC TCTCGATCGC CTGCCGGGCG CCGATGCGGC CGGCATGGCC
GGGCTTGCCG ACCGGACCGA TTATCATTGG GGCCATATGC TGAAGGCCAC GCTGGTTTCG
ACGCTGCTGG GCGTCGGCGC CGAACTCGGC GCCGACGACG AGGATCGCCT CGTTCGGGCG
GTGCGGCGTG GCGCGCAGGA CAGCATCAAC GAGACGGGAC GGCAACTCGT CGAACGCCAG
CTTGGAGTGA AGCCGACCAT CACGGTTCGG TCAGGCGCGA TCCTCCGCGT CATTGTGACG
CGGGACATCA TCCTCGAGCC TCTGGATCGA GGCGGACGGT GA
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| Protein sequence | MELVAVPPAS GEPFRLGAEP PSVMRLSRKA LAILGAALGT AIGGALLYAL QPAKLKVAEN
LYDSDRANKS ELVTGAPGDY GKIPKLGEPL PGDLGRPILA ARENGETVPV PPIGAPPPPD
PRAAAAEQAR ARAAQERESA RASQLFLGGG ASVTSQLPVL GEGVLRPAPD NLQANPTAAD
KRKGFLSGDG AGPAESMARL VQPSSPHLVQ AGSVIPAALI TGIRSDLPGQ ITAQVTQNVY
DSPTGRILLI PQGARLIGEY GSEIADGQSR VLLAWDRLIL PGGRSIALDR LPGADAAGMA
GLADRTDYHW GHMLKATLVS TLLGVGAELG ADDEDRLVRA VRRGAQDSIN ETGRQLVERQ
LGVKPTITVR SGAILRVIVT RDIILEPLDR GGR
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