Gene Sala_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2476 
Symbol 
ID4081314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2615744 
End bp2615965 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content68% 
IMG OID638010854 
Producthypothetical protein 
Protein accessionYP_617516 
Protein GI103487955 
COG category[S] Function unknown 
COG ID[COG5639] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0826573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.422433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC TCAGGCTCGG TCCGATCGCC GAAGACAAGC CGGTCAAACT GACTCTCGAA 
TTGCCCGGGC TGCTGGCGCG CGATGTGGCG GACTATGCCG CCGTCCATGC GGCGCAGACC
GGCCTCGCGA CCCCCTTGCC ACCTGAACGG CTCATCCCTG CCATGGTCGA GCGCTTCATC
GCAGCCGATC GGGGTTTTGC GCGCCTGCGT TCGAGGCGCT GA
 
Protein sequence
MTRLRLGPIA EDKPVKLTLE LPGLLARDVA DYAAVHAAQT GLATPLPPER LIPAMVERFI 
AADRGFARLR SRR