Gene Sala_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2465 
Symbol 
ID4081303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2605806 
End bp2606210 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID638010843 
Producthypothetical protein 
Protein accessionYP_617505 
Protein GI103487944 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.266004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA TTGACGGCGG AAGCGGTCAC TGGCTCGAGA GCCTGTTCCG CCTCGCCGTG 
GTTATCCTGG AACTGAGCGG CACGGCAACC ATCCTGACAG GTGCCGCGCT GGCGACCGCG
ACGTTTCTCC GTCAGGCCTG TCGAGGCCTC TATGCCGAAG CCTATCGTCC GTTCCGATCG
ACACTCGGTC GCAGCATATT GCTCGGCCTT GAGTTTCTCG TAGCGGGCGA CATCGTGAAA
TCACTGGTGA TCAACCCTAC GCTTAACGAC CTCGTCGTGC TCGCGGGCCT CGTGTTTGTT
CGTACCTTCC TGAGCATTTC GCTGGGCGTC GAGATCAATG GTCATTGGCC TTGGGAGAAT
ACGCGCATGG AGCGCGCCCG CCTCGACGCG GCGACGGACC GGTGA
 
Protein sequence
MITIDGGSGH WLESLFRLAV VILELSGTAT ILTGAALATA TFLRQACRGL YAEAYRPFRS 
TLGRSILLGL EFLVAGDIVK SLVINPTLND LVVLAGLVFV RTFLSISLGV EINGHWPWEN
TRMERARLDA ATDR