| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2456 |
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| Symbol | |
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| ID | 4081333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2597575 |
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| End bp | 2599269 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010834 |
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| Product | copper-resistance protein CopA |
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| Protein accession | YP_617496 |
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| Protein GI | 103487935 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.441362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.835222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCC TTCATAGCTT GCCGATCGCA CGGCGCCACT TCGTTCAGGG GCTGGCGATT
GGCGGAGCCG TCGCGGGCTT CGTCCCGGCA CTGCAGGCGA AATCCCTCTC CGCATCGACG
GCTGAATTGA GCGGGACCGA ATTCGACCTC GAGATCGCCG AGATCCCGGT CAACTATACC
GGCAAGCGCC GGGTCGCGAC GGCAGTGAAC GGCGCCGTAC CCGCGCCGGT CCTGCGCCTG
CGCGAGGGCG ACACCGTCAC GCTGCGCGTT CGCAACAGCC TCAAGGAGAT GTCCAGCATC
CACTGGCACG GGATCATCCT GCCCGCAGAA ATGGACGGCG TTCCGGGCAT CAGCTTCGCC
GGTATCGCGC CGGGCGAGAC CTTCACCTAT CGATTCGAAG TACGCCAAGT GGGCACCTAC
TGGTACCACG CTCATACGCT TGCCGAGCAG ACCGGACTTT ATGGAGCGAT TGTCGTCGAG
CCGAGAGTGC CGATGGGTCC CGTTCCCCAC CGCGACTATA CCATCATGCT GAGCGACTGG
TCGGACGAAC CACCGCTCCA GATCTTCACG AACCTCAAGA AGCTGAGCAG CTATTATAAC
TTCGCGCAGC CGACCGCCGG CGACTTTCTA GAGGATGTGA GCGAGTTGGG CCTCGCCAAA
GCCCTCGAAC GGCGGCGGAT GTGGAACGGG TCGCGGATGA ATCCGACCGA CTACAGCGAC
CTTTCCGCAG CGACCTACAC TTATCTTATG AACGGGACGA CGCCTGCGGG CAACTGGACC
GCCGTCGCCG CGCCCGGCGA GCATGTGCGC CTGCGCTTTG TGGGCGCGGG AACGGCGACC
TTCTTCGACG TACGGATTCC CGGTGTGGAG CTGACAATCG TTTCGACCGA CGGGCAGCCG
GTGGTGCCGG TGACGGTCGA GGAGTTCCGG ATCGGCCCGG GGGAAACCTA TGATGTCGAG
TTCACCATGC CCGATGGCAA TGCGCGCACG ATCTTCGCCC AGGCGATCGA TCGGACCGGC
TTTGCCCGCG GCACGATCGC GCCTGCTCCC GGCATGTCGG CACCGGTCCC CACCCTCGAT
GCGCGGCCCT GGCTCGATCC CGTCGACATG ATGGGGGCGA TGATGACGAT GGGCGGCGGC
GAGCACGCCG GGCACGGCCT GACGGAGATG CCGCCGAAGG CCCGGCATGC CCGCACCGAA
TATGGTGCGA ACACCGATAT GCGCGTCGAC TATCCCCGCG CCAATCTCGA TGATCCCGGC
GCCGGCCTGC GCGACCGCTC ATGGCGTGTC CTGACGCTGG CGGACTTGCG GACACCCAAT
GGCGATCCCG ATCCGCGCGA GCCCGAACGC GAGATCGAGC TCCACCTCAA CGGCAATATG
GAGCGCTTCA TCTGGGCGCT CGACGGAATC AAGCTCAATG ACTCGCGGCC GCTCCACTTC
AAGCCGAACG AGCGACTGCG CATCATCTTG GTCAACGACA CGATGATGTC CCATCCGATG
CACCTCCACG GCATGTGGAG CGATGTCGAA GGATCCGATG GCGCCTTCCA GGTCCGCAAG
CATACGGTGG TGGTCCAGCC TGCCCAGAGG GTGAGCTTCC GCGTCACCGC CGATGCTATG
GGTCGATGGG CGTTTCACTG CCATCTGCTC TACCATATGG CGGCCGGCAT GTTCCGGGAG
GTCGTCGTCG CATGA
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| Protein sequence | MPLLHSLPIA RRHFVQGLAI GGAVAGFVPA LQAKSLSAST AELSGTEFDL EIAEIPVNYT
GKRRVATAVN GAVPAPVLRL REGDTVTLRV RNSLKEMSSI HWHGIILPAE MDGVPGISFA
GIAPGETFTY RFEVRQVGTY WYHAHTLAEQ TGLYGAIVVE PRVPMGPVPH RDYTIMLSDW
SDEPPLQIFT NLKKLSSYYN FAQPTAGDFL EDVSELGLAK ALERRRMWNG SRMNPTDYSD
LSAATYTYLM NGTTPAGNWT AVAAPGEHVR LRFVGAGTAT FFDVRIPGVE LTIVSTDGQP
VVPVTVEEFR IGPGETYDVE FTMPDGNART IFAQAIDRTG FARGTIAPAP GMSAPVPTLD
ARPWLDPVDM MGAMMTMGGG EHAGHGLTEM PPKARHARTE YGANTDMRVD YPRANLDDPG
AGLRDRSWRV LTLADLRTPN GDPDPREPER EIELHLNGNM ERFIWALDGI KLNDSRPLHF
KPNERLRIIL VNDTMMSHPM HLHGMWSDVE GSDGAFQVRK HTVVVQPAQR VSFRVTADAM
GRWAFHCHLL YHMAAGMFRE VVVA
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