Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2453 |
Symbol | |
ID | 4081330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2592230 |
End bp | 2594527 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010831 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_617493 |
Protein GI | 103487932 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG2217] Cation transport ATPase [COG3350] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCGGAAG GCGCGGTTAC CGATCCCGTC TGCGGGATGG CAGTCGATCC GGAGACGAGT ATTCACCAGC TCACGCATGC CGGCGTCCAT CATTATTTCT GCAGTGCGGG ATGTCTGGGC AAGTTCAGAG CGGACCCGGC TCGCTATCAC GGCGGCGCGG AGAACTCGGC ACCGCCCCCT CCGAAGGGCG CGATCTGGAC GTGTCCGATG CATCCCGAGA TCCAGCGGCC GGGACCAGGA GCTTGCCCGA TCTGCGGAAT GGCATTGGAG CCTATCGTTC CCGAAGCCAC CGACGGCCCG AGCGAAGAAT ATCGGGACAT GCGCCGACGC TTCTGGATCG GCCTGGTGCT TGCGCTTCCG GTCCTTGCCC TCGAGATGGG CGGGCACATG ACCGGACTTC ATATGCTGAT CTCCCGCCAG GCTAGTAATT GGGTCCAGAT GCTGCTTGCG ACGCCCGTCG TCCTCTGGGC GGGCTGGCCG TTCTTCGAGC GCGGCTGGCA GTCGCTGCGT ACGCGTAACC TCAACATGTT CACGCTGATC GCAATGGGGA CAGGCGTTGC CTGGCTTTAC AGCATGGTCG CAGCACTCTT GCCCGATATC TTTCCAGATG CTTTCCGCGC CGCGGACGGT TCGGTGGCGG TCTATTTCGA GGCAGCCGCC GTAATCACGG TGTTGGTGCT GCTCGGCCAG CTACTCGAAC TGCGCGCCCG CGAGACAACC AGTGGCGCGA TCCGGGCGCT TCTCGATCTT TCACCGAAGC TCGCCCGCCG CGTCGCCGCG GACGGCAGCG ACGAGGAAAT AGACCTTTCC GAGGTTGTGG TAGGCGACGT CCTGCGAGTC CGCCCTGGCG AGAAGGTCCC GGTAGACGGT ATCGTCATGG AAGGGCGGAG CACGGTCGAT GAATCCATGG TTACCGGGGA ATCCATGCCC ATCACGAAGG ACATCGGGGC CGCGCTGATC GGTGGAACGA TCAATCAGAC CGGCGGACTT GTGATGCGAA GCGAGAAGGT CGGCCGCGAT ACGATGCTTG CGCGTATTGT GCAGATGGTG GCCGACGCCC AGCGCAGCCG TGCCCCAATT CAGCGGCTCG CCGATGCGGT ATCGGCCTGG TTCGTGCCGA CCGTCATTCT GGTCGCACTG GTTGCCTTCG TCGCCTGGTC GCTATTCGGC CCGGCGCCAT CGATGGGATA TGGACTTGTG GCCGCTGTCG CGGTCCTCAT TATCGCCTGC CCCTGCGCGC TCGGTCTCGC GACGCCGATG TCGATCATGG TCGGCGTTGG CCGCGGTGCC GAGGCTGGAG TGCTGATCAA GAACGCCGAG GCCCTGGAGC GCATGGAGAA GGTCGACACT CTGGTCGTCG ACAAGACCGG AACGCTGACG GCCGGAAAGC CTTCGGTCGT CGCCATCGAA GTTGCGGAGG GTTTTGCCGA GGAAGAGATT CTGCGCATTG CGGCAAGCCT TGAACGTACA AGCGAACACC CGCTGGCACA GGCGATCGTC CAGGCCGCCG AGCAGCGCGG GATCAAGCTC CTCGAACCGA CCGCAGTCGA CCAGCCGGTT GGCAAGGGCA TAGTCGGCAT GGTCGACGGG CAAACCGTGC AGGCGGGCAA CGCGAGTTTC CTGGCCGAAT ATGATATCGG CCCCGGCGAC CTCGCGGGTC CGGCCGACCG GCTGCGCGGG GACGGGGCTA CCGCCATTTT CCTGGCAATC GGCGGGCGCG CAGCGGGCGT CATCGCCATC GCCGATCCGG TAAAGGAGAC AACTCCGGCA GCGCTCAGGG CGCTCAGGGA GGCCGGCATC AAGGTAATCA TGCTGACGGG CGACAACCGC ACGACCGCGC AGGCGATAGC GCGGCGCCTC GATATTGCCG ATGTCGAGGC CGACGTCCTG CCGGACCAGA AGAGTGCCGT GGTAACGCGC CTTCGCGAGG AAGGGAGAAT TGTCGCAATG GCCGGCGACG GCGTCAACGA CGCGCCCGCG CTCGCTGCTG CCGATGTCGG GATCGCGATG GGATCGGGCA CCGATGTCGC GATCGAGAGC GCCGGAGTGA CGCTGCTCCA TGGCGACCTG ATGGGTATCG TCCGGGCGCG GCATCTCAGC CATGCCACGA TGCGGAATAT TCGCCAGAAT CTCTTCTTCG CCTTCGCATA CAATGTCGCC GGGATTCCGA TCGCGGCTGG CGCGCTCTAT CCGGTTTTCG GCTTGCTGCT GTCGCCGATT ATCGCCGCCA CCGCGATGGC GCTCTCTTCG GTCAGCGTGA TCGGCAATTC GTTGCGACTG CGCCTGGTGA AAATCTGA
|
Protein sequence | MAEGAVTDPV CGMAVDPETS IHQLTHAGVH HYFCSAGCLG KFRADPARYH GGAENSAPPP PKGAIWTCPM HPEIQRPGPG ACPICGMALE PIVPEATDGP SEEYRDMRRR FWIGLVLALP VLALEMGGHM TGLHMLISRQ ASNWVQMLLA TPVVLWAGWP FFERGWQSLR TRNLNMFTLI AMGTGVAWLY SMVAALLPDI FPDAFRAADG SVAVYFEAAA VITVLVLLGQ LLELRARETT SGAIRALLDL SPKLARRVAA DGSDEEIDLS EVVVGDVLRV RPGEKVPVDG IVMEGRSTVD ESMVTGESMP ITKDIGAALI GGTINQTGGL VMRSEKVGRD TMLARIVQMV ADAQRSRAPI QRLADAVSAW FVPTVILVAL VAFVAWSLFG PAPSMGYGLV AAVAVLIIAC PCALGLATPM SIMVGVGRGA EAGVLIKNAE ALERMEKVDT LVVDKTGTLT AGKPSVVAIE VAEGFAEEEI LRIAASLERT SEHPLAQAIV QAAEQRGIKL LEPTAVDQPV GKGIVGMVDG QTVQAGNASF LAEYDIGPGD LAGPADRLRG DGATAIFLAI GGRAAGVIAI ADPVKETTPA ALRALREAGI KVIMLTGDNR TTAQAIARRL DIADVEADVL PDQKSAVVTR LREEGRIVAM AGDGVNDAPA LAAADVGIAM GSGTDVAIES AGVTLLHGDL MGIVRARHLS HATMRNIRQN LFFAFAYNVA GIPIAAGALY PVFGLLLSPI IAATAMALSS VSVIGNSLRL RLVKI
|
| |