Gene Sala_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2444 
Symbol 
ID4081321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2582648 
End bp2583385 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID638010822 
Productcation efflux protein 
Protein accessionYP_617484 
Protein GI103487923 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGGC GGTCCTCGTC CGAAGTTGAA GGCGGCAAAG CGAAGAGCGC GCCACCACCA 
TGGAGTGAAG ACGCGATGGC GGAGGGATCC GAGAACGGCG ACGGCTGCGG CTGCACGGGA
GACCCGGTGC GCGCGGAAAA GGACCCGGCC TATCGCCGTG CTCTTTGGAT CGTGGTTATC
CTAAATCTCG GCTTCGGCGC TATCGAGATC GTCGGCGGAT TCATCGCCAA CAGCCAGGCG
CTGAAGGCCG ACTCGCTCGA CTTCATCGGC GACGGCACCA TCACGCTGGC CGGCCTCGTC
GCGATCGGCT GGACGGCGCT CGCCCGCACC CGCATCGCTC TTGCCCAAGG CCTGTTCCTG
CTGACGCTCG GGCTCGGCGT CATCGGCGTC GCGCTGTGGC GCGCCCTGAC AGCGGTTCCG
CCCGAAGCCG AGCTCATGGG CGGCATCGGC TTCGTTGCAC TGCTCGTCAA TCTCACCTCG
GCGGCGGTCC TCTCGCGGTT TCGCGAAGGC GACGCCAATG TCCGCGCTGT TTGGCTGTTC
AGCCGCAATG ACGCGGTCGC CAATGTCGCG GTAATCATCG CTGCGGGTCT CGTCGCATGG
ACCGGCCAGG CCTGGCCCGA CCTTGCAGTG GCCGCCATCA TTGCAGCGCT CTTCCTGCAT
TCGGCCTATG AAATTCTTCG CAGCGCGCGG ACCGAGCTGC GCCAACTGTC GGAACAAGGG
ATTCGTGGTC AGGCTTGA
 
Protein sequence
MYRRSSSEVE GGKAKSAPPP WSEDAMAEGS ENGDGCGCTG DPVRAEKDPA YRRALWIVVI 
LNLGFGAIEI VGGFIANSQA LKADSLDFIG DGTITLAGLV AIGWTALART RIALAQGLFL
LTLGLGVIGV ALWRALTAVP PEAELMGGIG FVALLVNLTS AAVLSRFREG DANVRAVWLF
SRNDAVANVA VIIAAGLVAW TGQAWPDLAV AAIIAALFLH SAYEILRSAR TELRQLSEQG
IRGQA