| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2416 |
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| Symbol | |
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| ID | 4080854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2553069 |
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| End bp | 2553974 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010795 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_617457 |
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| Protein GI | 103487896 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.312815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC GTCACCTCGA AGCCTTCAGG GCCGTGATGC TCTCGGGATC GGTCACCCAG
GCCGCGCAGT CGCTCAACCT GTCGCAACCC GCGGTGAGCA AGATGCTTGC CGAGCTCGAG
CATCAGCTGG GCTTTCAGCT CTTCCTGCGT TCGCGCGGCA GCGCGCTCAC CGTGACGCCC
GAAGCCGACG CCTTTTTCTA CGAAGTCGAG CGGAGCTTCT CCGGTATTGC GGCCCTGAAG
CGGGTAGCGG AAGACATCCG CAACATGGCG ACCGGCACGC TCCGGATCGC CGCCCTCCCG
GCGCTCGCGG TCAGTTTCCT GCCGCGCGTG ATCGCGGCCT TTCGCGAGAC GCATCCCGGC
GTCACCGTTC AGCTCCAGAC CCGCAGTTCC TCGACGGTGC GGCAATGGAT GGCGAACCAG
CAGTTCGACA TCGGGCTCGC GACGCCGGCG CGCGAATTGC CCGGCATAAG GATGGAGCGC
TTCCTGCGCT GCCCCGGCGC CTGCGTTCTC CCTGCCGGCC ACCGCTTGGC CGTCAAGGAC
GTCATCCGGC CGGCCGATCT CGAGGGCGAG CCCTTCATTT CGCTCGCGCT CGAGGACGGC
GTGCGTCACC GCATCGACCG CATTTTCGAG GACGCGGGCG TCCACCGCGA GATGGTCATC
GAAACCCAAT ATGCGATGAC CATCTGCGCG CTTGTCATGC AGGGGGTCGG ATGTTCGATT
CTCAACCCCG TGACCGCAGC GGATTATGCC GAGCGGGGCC TTACGGTCCG TGATTTCGCG
CCGGAGGTCC ATTTCGAATA TATGCTCTTC ACGCCGAAGT TGAGGCCGAT GTCCCAAGTC
GCTGCGGCCT TTATCGCGGT GCTCGAATCC CACCGCGACG CGATGTTCGG CTCCGACGCC
AGCTGA
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| Protein sequence | MNLRHLEAFR AVMLSGSVTQ AAQSLNLSQP AVSKMLAELE HQLGFQLFLR SRGSALTVTP
EADAFFYEVE RSFSGIAALK RVAEDIRNMA TGTLRIAALP ALAVSFLPRV IAAFRETHPG
VTVQLQTRSS STVRQWMANQ QFDIGLATPA RELPGIRMER FLRCPGACVL PAGHRLAVKD
VIRPADLEGE PFISLALEDG VRHRIDRIFE DAGVHREMVI ETQYAMTICA LVMQGVGCSI
LNPVTAADYA ERGLTVRDFA PEVHFEYMLF TPKLRPMSQV AAAFIAVLES HRDAMFGSDA
S
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