| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2408 |
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| Symbol | |
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| ID | 4080846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2542523 |
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| End bp | 2543323 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638010787 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_617449 |
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| Protein GI | 103487888 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.067403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.204125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTA CCACTCGCAC CCCCGGACGC GGATCAAAAC TCTCGAATGG ATCTGCGGCC
GCCCGGCCCG GCAACTCCGA TGACGAAAAT GACAAGTCTC CGCCTCGCTA TGCCGCCATC
AAGCAGAGCA TTTGCGATGC CGTTCGCGAC GGACTTCTTA AGCCGGGCGA CCGGGTTCCA
TCGGAAGCAG AGCTAGTCCA ACAATTCGAC GTGTCACGGA TGACCGCCAA TCGGGCGCTT
CGCGAACTAC AGGCGGCAGG CGTTCTTGTA CGCCGCGCGG GTAGCGGATC GTTCATCGCC
GAGCCCAAGC CGATCGGCCA GATGATCGAA ATTCGCAATA TCGCCGAAGA GATCCGCGAG
CGCGGTCACA TCTATCGGGC CCGCGTCGTG CAGAATGACG AGATACGCGC CAATGCGGAC
CTTGCGGCGC TACTGGAGGT TCCGGTCGGC ACGAGGCTTT TCCACTCGAT CATCGTTCAT
CACGAAGCCG AGTTCCCGAT CCAGCTCGAG GAGCGTTTCG TGCTCGCGTC GGCGGCTCCC
GATTATGGGA AGATCGACTT CACCCAGATG ACGCCGAACG AATATCTGAC GCGGACGGCG
CCGCTCGAGC GCGTCGAACA TCGGGTTCGC GCCGAGATGC CCGACGCGCA CACCCACAGC
ATGCTGGGGC TCTCGGACGG CGAACCCGTG TTGCGGATGA CGCGGCGGAC GTGGAGCCAT
TCGCGCCTCG TCAGCCATGC CTGGCTGACG CATCCCGGAT CGCGATTCGA GCTGTCGGCG
GCCTTCTCGA TCGACGATTG A
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| Protein sequence | MDVTTRTPGR GSKLSNGSAA ARPGNSDDEN DKSPPRYAAI KQSICDAVRD GLLKPGDRVP
SEAELVQQFD VSRMTANRAL RELQAAGVLV RRAGSGSFIA EPKPIGQMIE IRNIAEEIRE
RGHIYRARVV QNDEIRANAD LAALLEVPVG TRLFHSIIVH HEAEFPIQLE ERFVLASAAP
DYGKIDFTQM TPNEYLTRTA PLERVEHRVR AEMPDAHTHS MLGLSDGEPV LRMTRRTWSH
SRLVSHAWLT HPGSRFELSA AFSIDD
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