| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2401 |
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| Symbol | |
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| ID | 4080553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2537090 |
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| End bp | 2537818 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010780 |
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| Product | phage integrase |
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| Protein accession | YP_617442 |
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| Protein GI | 103487881 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.340015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0277032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG GCGGGCCCGG CGTGGCGGGC CGCTGCCTCG GCACGCTTCA GGCGATCATC
GGTCACGCGA AGCACAAGGG TCTGCTCGAA GTACACCCGA CCCTCGGGGC CAAGAAGCTC
GCGAGCAAAA AGAAGACGCG GCGCCTCAGC GTCGCTGAAA TCGAGATGAT GGGGAAGGCC
ATCGCTCATG CCGAGGCGAG CGGCGAGAAT CCGGTCGCTC TCGGCGTCCT GCGCACCTTG
CTGCTGACGG GCTATCGCCG GGAAGAAGGG CAAGCGATGC GCCGCAGCTG GCTTCATCCC
GATGCCGGCT ATGTTGCTTT TCCCGACACG AAGGGCGGCG CACAGATTCG AGCGATCGGT
CCGGCCGCGG TGCGGGTTCT GCAAGACCAG GCAGAGATTG CGGGCAATCC GCACCTGTTT
CCCTCGACCA TCGGCGACGG TCCCTTCACG GCGGTTAGCG AGTGCCTCCG GCGCGTGTGC
GTTTTGGCAG GTATAGAGGG TGTGACGCCC CATACGCTTC GCCACACCTT CGGAAGCGTC
GCGGGAGATT TGGGATTCTC GGAACTCACG ATCCGCGCAA TGCTCGGACA TGCTTCGCAG
AATGTGACCC AGGATTATGT CCACATCGAT GAAGCGCTGA AACTCGCTGT CCGGCGGACC
TCGGACGAAA TCGAGCGGCT GCTGGCGAGC GGCGCGGCCA AGCTCGGGAC CATGCGACAC
GCCGCTTGA
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| Protein sequence | MATGGPGVAG RCLGTLQAII GHAKHKGLLE VHPTLGAKKL ASKKKTRRLS VAEIEMMGKA
IAHAEASGEN PVALGVLRTL LLTGYRREEG QAMRRSWLHP DAGYVAFPDT KGGAQIRAIG
PAAVRVLQDQ AEIAGNPHLF PSTIGDGPFT AVSECLRRVC VLAGIEGVTP HTLRHTFGSV
AGDLGFSELT IRAMLGHASQ NVTQDYVHID EALKLAVRRT SDEIERLLAS GAAKLGTMRH
AA
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