| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2393 |
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| Symbol | |
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| ID | 4080546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2526745 |
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| End bp | 2529879 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010773 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_617435 |
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| Protein GI | 103487874 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.73106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0219915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGC GGATCATTCG CGCCTCGGTC GCCGCGCGCG GGCTGGTCGT CGCCGCGGCG
CTGATCCTGA CGCTTGTCGG GATCGCCGCG GTGCGGACGA CGCCCGTCGA CGCCATCCCC
GATCTGTCGG ACGTGCAGGT CATCATCCGC ACCACCTATC CGGGTCAGGC GCCGCGGATC
GTCGAGGATC AGGTGACCTA TCCGATCAGT TCGACGATGC TGTCGGTGCC GGGCGCGCGC
GTGGTGCGCG GTTATAGCTT TGTCGGCGAC AGTTTCGTCT ATGTGCTGTT CGACGATGAC
ACCGATCTCT ATTGGGCGCG GAGCCGGGTG CTCGAATATC TGAGCCAGGT GCAGGGAAAA
TTGCCCGACG GCGCGACGGC GTCGATCGGT CCCGATGCCA CCGGCGTCGG CTGGGTCTAT
GAATATGCGC TGGTCGACAA GAGCGGTCGC CACGATCTGG CGGAATTGCG TTCGATCCAG
GACTGGTTCC TGCGCTACGA ATTGAAAGCC GTTCCCGACG TCGCTGAGGT TGCGACGATC
GGCGGGATGG TCAAGCAATA TCAGATCGTC CTCGATCCGC AGAAGCTGGC CTCCTATGGT
GTGACGGTGC GCGAGGTCAG CGACGCCTTG ACGGCCGCCA ATCAAGAGGC TGGCGGCGCG
ACCGTCGAAC TGGCCGAGGC CGAATATATC GTTCGCGCCA GTGGTTACCT GAAAACGCTC
GACGATTTCC GCGCGGTCCC CATCCGTACC GCCGCCGGCG GGGTGCCGGT CACCGTCGGC
GACATCGCGA CGGTCCAGAT CGGCCCCGAG ATGCGGCGCG GTATCGCCGA GCTTGACGGC
GAAGGTGAGG TGGTCGGCGG CGTGATCGTG ATGCGGCAGG GCAAAAATGC CCGCGAAGTC
ATCGAGAATG TCCGCGCCAA GCTGGATAGC CTGAAGGCAA GTCTGCCCGC CGGGGTCGAA
ATCGTCACCA CTTACGACCG GTCGGGACTG ATCGACCGCG CGGTTGAAAA CCTCTCGTCG
AAACTGATCG AGGAAATTGT GATTGTCGCG CTGGTCTGCG GGTTGTTCCT GTGGCACGCG
CGCTCGGCGC TGGTGGCAAT CCTGACGTTG CCGCTCGGCA TATTGATCGC CTTCATCGCG
ATGCGCGCGC AGGGTCTGAA CGCCAATATC CTGTCGCTCG GCGGCATCGC GATCGCGATC
GGCGCGATGG TCGATGCCGC GGTCGTCATG ATCGAGAATG CCCATAAGCA TATCGAGCGT
TGGACCCACG AAAACCCGGA CGACAAACTG GAAGGAGCCG AACGGTGGCG CGTGATAACC
GGCGCGGCGG CCGAGGTCGG CCCGGCGCTG TTCCTGAGCC TGCTCATCAT CACCTTCTCG
TTCATCCCGA TCTTTGCGCT GCAGGGTCAG GAGGGGCGCC TGTTCGCGCC GCTGGCGTTC
ACCAAAACCT ATGCGATGGC GGCGGCGGCG CTGCTGTCGA TCACCCTCGT GCCGGTGCTG
ATGGGCTGGC TGATCCGCGG CAAGATTCCT GACGAGAATG CCAACCCGAT CAATCGCTGG
CTGACCCGCC TCTATCGCCC CGGTCTCGAT TGGGTGCTCG CGCGTCCGAA ACAGGCGCTG
CTGATCGCGG CGCTGGTCTT TGCGACCAGC CTCTGGCCGA TGGCGCGGCT GGGCGGCGAA
TTCATGCCGC AAATGAACGA AGGGGATCTT CTCTATATGC CCTCGGCGCT GCCCGGGATT
TCGGTGGCTG AAGCAGGAAA GCTGCTCCAG CAGACCGACC GCCTCATCAA GACGGTGCCC
GAGGTTGAGC GCGTGTTCGG CAAGGCCGGA CGCGCCGACA CCGCAACCGA TCCGGCACCG
ATCGAAATGT TCGAAACGAC GATCCAGTTC AAACCCGAAA GCGAATGGCG CGCAGGGTTG
ACGCAGGAAA AACTGATCGA GGAACTCGAT GCGCGCGTGC GCGTTCCGGG GCTCGCCAAT
TTCTGGGTGC CACCGATCCG CAATCGGATC GACATGCTGG CGACGGGAAT CAAGAGCCCG
ATCGGGATCA AGGTCGCCGG GTCCGATCTC AAGGCGATCG ATGTAAGCGC CAGGCAGATC
GAGGACGTCG TCAGAAAGGT GCCGGGGGTG GCGTCGGCGC TCGCCGAACG GTTGACAGGC
GGCCGTTATA TCGATGTCCA GATCGATCGC GCGGCGGCGG CGCGCTACGG CATGAATATC
GCCGACGTCC AGACGATCAT CGCGGGCGCG ATCGGCGGCG AGACGATCGG ACAAACGGTC
GAGGGACTGG CGCGCTATCC GATCAGCGTC CGCTATCCGC GGGAAATCCG TGACAGTCTC
GACGAGATCA TCAACCTGCC CGTGTTGACG CCCTCGCGCC AGCAGATCAC GCTCGGCACC
GTCGCCGACG TCCGCATCAC TGACGGCCCG CCGATGCTGC GCAGCGAGAA TGGCCGCCCG
GTGACCTGGA TTTACGTCGA CGGCCGCGGA CGTGACTTGC AGACGCTGGT TCAGGATATG
CAGACGGCGA TCGCACGTGA GGTCAAATTG CCGCCAGGGG TCAGTGTCTC CTACACCGGC
CAGTTCGAAT TTCTGGTCCG CGCCACCGAG CGGATGAAGA TCGTCGTTCC GGTGACGCTC
GCGGTCATCC TGGGACTGCT CTATCTGACG TTCCGGCGTC TAGATGAGGC CCTTCTGATC
ATGGGCACCC TGCCTTTCGC GCTCACTGGC GGATTGTGGC TGCTCTATCT GCTTGGATAT
AACCAGTCGG TCGCCAGCGC CGTCGGCTTC ATCGCGCTGG CCGGGGTGTC GGCGGAATTC
GGCGTGGTGA TGCTGATCTA CCTCAAGCAA GCGCTCGCTG CGCGCACCGA CGGTGACGTC
GCGGCGGGCG TGCGCGAAGG GGCGCTTCTG CGCGTCCGCC CCAAGGCGAT GACCGTCGCG
GTCATATTGG CGGGGCTTTT CCCGATTCTG ATCGGAACGG GGACCGGTTC GGAGGTGATG
AGCCGGATCG CCGCTCCGAT GATCGGCGGC ATGATCACGG CGCCGCTGCT TTCGATGTTC
GTCATTCCCG CCGCCTATCT GCTGATGCGC CGCAACGCCG CGCCGTCAGC ACAACCCGAA
GAGGACTTGA AATGA
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| Protein sequence | MIKRIIRASV AARGLVVAAA LILTLVGIAA VRTTPVDAIP DLSDVQVIIR TTYPGQAPRI
VEDQVTYPIS STMLSVPGAR VVRGYSFVGD SFVYVLFDDD TDLYWARSRV LEYLSQVQGK
LPDGATASIG PDATGVGWVY EYALVDKSGR HDLAELRSIQ DWFLRYELKA VPDVAEVATI
GGMVKQYQIV LDPQKLASYG VTVREVSDAL TAANQEAGGA TVELAEAEYI VRASGYLKTL
DDFRAVPIRT AAGGVPVTVG DIATVQIGPE MRRGIAELDG EGEVVGGVIV MRQGKNAREV
IENVRAKLDS LKASLPAGVE IVTTYDRSGL IDRAVENLSS KLIEEIVIVA LVCGLFLWHA
RSALVAILTL PLGILIAFIA MRAQGLNANI LSLGGIAIAI GAMVDAAVVM IENAHKHIER
WTHENPDDKL EGAERWRVIT GAAAEVGPAL FLSLLIITFS FIPIFALQGQ EGRLFAPLAF
TKTYAMAAAA LLSITLVPVL MGWLIRGKIP DENANPINRW LTRLYRPGLD WVLARPKQAL
LIAALVFATS LWPMARLGGE FMPQMNEGDL LYMPSALPGI SVAEAGKLLQ QTDRLIKTVP
EVERVFGKAG RADTATDPAP IEMFETTIQF KPESEWRAGL TQEKLIEELD ARVRVPGLAN
FWVPPIRNRI DMLATGIKSP IGIKVAGSDL KAIDVSARQI EDVVRKVPGV ASALAERLTG
GRYIDVQIDR AAAARYGMNI ADVQTIIAGA IGGETIGQTV EGLARYPISV RYPREIRDSL
DEIINLPVLT PSRQQITLGT VADVRITDGP PMLRSENGRP VTWIYVDGRG RDLQTLVQDM
QTAIAREVKL PPGVSVSYTG QFEFLVRATE RMKIVVPVTL AVILGLLYLT FRRLDEALLI
MGTLPFALTG GLWLLYLLGY NQSVASAVGF IALAGVSAEF GVVMLIYLKQ ALAARTDGDV
AAGVREGALL RVRPKAMTVA VILAGLFPIL IGTGTGSEVM SRIAAPMIGG MITAPLLSMF
VIPAAYLLMR RNAAPSAQPE EDLK
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