Gene Sala_2382 details

Gene Information

• Locus tag: Sala_2382
• ID: 4080822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: +
• Start bp: 2504500
• End bp: 2510277
• Gene Length: 5778 bp
• Protein Length: 1925 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638010762
• Product: alpha-2-macroglobulin-like protein
• Protein accession: YP_617424
• Protein GI: 103487863
• COG category: [R] General function prediction only
• COG ID: [COG2373] Large extracellular alpha-helical protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.465265
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCCGCTGA CGCTCGCGAT TGCCGCGACC GCCGCCGACA CCGTGCCGCA GGTCATCCTC 
GCGACTCCGG GCAGCAGCGG CACCGGCGAG GGGACGGTCA CCCGCTTTAC GCTGCGCTTT 
TCCGAAGACA TGGTCGCGCT CGGCGATCCG CGCGCCGCCG CCCCCGCGAC CAACGACTGC 
AAGCGCCCGT CGACCGCCCG CTGGGTCGAC ACGCGCACCT GGGTGCTCGA GTTCGACGCG 
CCCTTGCCCG GTGGGTTGCG CTGCCATGTC GAGCTGCGGA GCGGGCTCGT CACCGCGCGC 
GGCGTCGCGG TCACCGGGAA CGACCGGTTC GCGATCGACA CCGGCGGCCC CTCGGCGCGC 
GCGGTGCTCG CGGGCGGGAT CGGCGGCGGG ATCGAGGAGG AGCAGGTCTT CCTCGTCGCC 
ACCAATGTCG CCGCCGACCG CGCCTCGGTC GCCCGCTACG GCTATTGCGC GGTTGACGGC 
ATCGGCGAGA AGATCCCGCT CGACGTGCTG CCGCGCGCGA CCGCGACCGA GATCCTGACC 
GGGCTTGGCG ATGCCAACTG GTCGCGCCAG TCCTTCACCT ACGACGCCGG ACTGCCGCAG 
CGCCTGCCCG CCGCGGGCGC CGAGCGCGAC GCGGCGCTGG GCCGGATCGT CGCGGTCAAG 
TGCCGCCGCC CGCTGCCGCC GGGGCGCGAC ATGGCGCTCG TCTGGGACGC GCGCATCAGC 
CAAGCGGGCG TCCCCGGCCG CACCGCCGGG CGCGACCAGC GCTTCGACTA TGACGTGCGC 
CCCGCCTTCA CCGCCAAAAT GACGTGCAGC CGCGTCAATC CGCAGGCGGG GTGCAACCCG 
ATCAAGGATG TTGTGCTGCG CTTCACCGCG CCCGTCGCGC GCGACACCGC GCTCGCGGCG 
AAGCTGACCA CCGCCGACGG CCAGACGATC GCGGCAAAGT TCGACGACGA CGACCGGGGC 
GACACGCATC TGACGCAGGT CCGCTTCGCC GGGCCGCTGC CGCAGAATGT CGACGCGGCG 
CTGATCCTGC CCGCCGACGT CACCGACCAG AGCGGCCGCG CGCTGCTCAA CGCGTCGAAC 
TTCCCGCTCG ACTTCCACAT CGACCGCACC CCGCCGCTCG TCAAATTCGC CGCCGAATTC 
GGCATATTGG AGGCGAGCGA GGGCGGCGTG CTGCCCGTCA CCGTGCGCGG CGTCGAAGCC 
TCGCTGGTTC AGAAGAATCT CAAAATGCCC GCCGCAACGC TGCGCATCGG CGACGACGAT 
GCCGCGGTCG CGCGCTGGCT CCGCCGCGTC GCGGATGCCG ACGACAGCGA TTATCGCGAG 
GAAAAGGATG CCGCGGGCAA GGAGATCACC GTCAACTACA CCGGCACCAA ATCACTGTTC 
GACGGCGCGC CGCCCGGCGG CGAGCGCCGC GATATGCAGC TCACCCCGCC CGCGGGCGGC 
AAGGAGTTCG AGGTCGTCGG CATTCCGCTC GCCGAAAAAG GTTTCCACAT CGTCGAGGTC 
GCGAGCCCCG AACTCGGCGC CGCGCTGCTC GGTCGCAAGG CGACGCGCTA TGTCGCGACC 
GCCGCGCTCG TCACCGACAT GGCGGTGCAT TTCAAATGGG GCCGCGACGG CTCGCTCGCC 
TGGGTCACAT CGCTCGCGAC CGGCAAGCCC GTCGCAGGCG CCGAAATCCG CGTTTCCGAC 
AGCTGCACCG GCCGCCTGCT CGCGCGCGGC ACCGCCGACA AGGCGGGCCG CCTCGCCTTC 
CCCTCGGGCC TGCCGCAGCC CGAAACCTAT TCGAACTGCG AAGACGACGC CGACCCCACG 
AACAGCGAGG GTCATGCGCT GATGGTCAGC GCGCGGTCGG GCGATGATTT CAGCTTCACC 
CTCACCGACT GGGGCGACGG CATCCGCCCC TATGACTTCG ACCTCCCCTA TGGCTGGTCG 
GAGCGCGAGG ACATTCTCCA CACCGTCTTC GACCGCGCGC TCGTCCAGGC GGGCGAGACG 
GTGCATATGA AGCATGTGCT GCGCCGCCCC GTCGGCCTCG GCTTTCGCAC CCCCGAACCG 
CTGGCGGGCA AGCTCCGCCT CGTCCACCGC GGCTCCGATA CCGAGTTCGA AATGCCCTTT 
GCGATTGCCG CCACCGGCAG CGGCGAGAGC GTGTGGAACG TCCCGCAATC GGCGCCGATG 
GGCGATTATG AACTCGTCTT CGTCACCACA GACAAAAAGG GCGAGGACAG GAGCATCTGG 
ACGGGCCAGA GCGTGCGCGT CGACGAATAT CGCCTGCCGA CGATGAAGGC CGCGATCACC 
GGCCCCAAAG GCGCGCTCGT GCGCCCAGCC GCGGTGCCGC TCAGCCTGTT CGTCGGCTAT 
CTGTCGGGCG GCCCCGCGCC GGGCATCCCC GTTGAACTGC GCACCAGTTT CCGCGCCGCC 
TGGTCGCCGC CAGAGGATTA TCGCGACTGG GATTTCGACG GCCGCCCGGT CAGGGAAGGC 
ACCGTCCAGC TCGACGACAG CGGCGAGGAA CCCGGCGGCG ACCTGCCGCT CGCGCGCTCG 
GTGCCGCTGA CGCTCGGCGC CGACGGCACC GCATCGACCA GCGTCATCGT CGACCAGCCG 
ATCAGCGAGC CCACGGTGAT GGCCGCCGAA ATGGACTATG CGGATGCCAA TGGCGAAACG 
CTGACCGCGA GCCGCCGCAT CACCCTTTAT CCCTCCGCCG TCCGCCTCGG CCTCAGGACC 
GACGGCTGGA TGATGCGCGA CGATGATCTG CGCCTCAATT TCATCGCGCT CGACCTGGGC 
GGCAAGCCGA TCCGCGGCCA GCGCGTCGAT GTCGCGCTCT ACAGCCGCCA GATCATCACC 
GCGCGCCGCC GCCTGATCGG CGGCTTCTAT GCCTATGACA ACCAGATGCG CACCGCGAAG 
CTGTCGGCGA ACTGCACCGC GACGACCGAC CGGCTCGGCC GCGCCAGCTG CGCGATGGCG 
CCCGGCGTCT CGGGCGAAGT CACCGTCGTT GCGACGACGC ACGACGCCGA CGGCAACGAA 
GCGCGCGCCG TCCGCTCGGT CTGGCTCGCG GGCGACGACG AATGGTGGTT CGGCGGCGAC 
AATGGCGACC GCATGGACGT GATCGCCGAA GCGCCGCGCT ACGCCGCGGG CGACACCGCG 
CGCTTTCAGG TGCGGATGCC CTTCCGCGAA GCGACCGCGC TCGTCACCGT CGAGCGCGAG 
GGCGTGCTAT CGAGCTTCGT CGTGCCCCTG AAGGGCACCA ATCCCGTCGT GACGGTCAAG 
CTGCCCGCGA CCTACGCTCC CGACGTCTAT GTCTCGGTGA TGGCGGTGCG CGGGCGCGTC 
ACGGGGCAGG AAAGCTGGTT TCGCAAGATG AAGCGCGCGG TCGGTTTCCA GATCGAGACG 
AGCGAAGGCG CGCCGCCGAC CGCGCTCGTC GATCTTGCCA AGCCCGCCTA TCGCATCGGC 
ATCGCGCGCA TCAAGGTCGG CTGGGAAGGG CATAAGCTCG ACGTCAAGGT CCGCGCCGAC 
AAGGAAAAAT ATGCGGTGCG CGAAACCGCG AAAGTCGGCA TCGAGGTCAA GGCGCCGGGC 
GGCAAGGCGC CGAAGAATGC CGACGTCGCC TTCGCCGCGG TCGACGAGGC GTTGCTCCAG 
CTCGCCCCCA ACGAAAGCTG GGACATACTC GCCGCGATGA TGGGCGACCG CACCCTCGAC 
GTGCTCACCT CGACCGCGCA GATGCAGGTG GTGGGTAAAC GCCATTATGG CCGCAAGGCG 
CTCGAACCGG GCGGCGGCGG CGGCGGCGAC CTCAGCGGGC TGACGCGCGA GGATTTCCGC 
CCGGTGCTGC TCTGGAAAGG CACTGTCCCG CTCGACGCCA GGGGCCGCGC CTCCATCGAT 
GTGCCGCTCA GCGACAATCT TTCGGGCTTC CGCCTCGTCG CGATCGCGAC CGACGGATCG 
CAATTTTTCG GCACCGGCGA AACGAGCGTG CGCACCGTGC AGGATCTCGG CGTCTTTGCC 
GGGCTGCCCG AACTGGTCCG CACCGGCGAC GCCTATGACG CGCGCTTCAC GCTGCGCAAC 
GGCACCGACA AACCGATGGA GGTCACCGCG ACCGCGACGA TCTCGCCCGC GATCGCGACC 
GCGCCGCCCC TGACGGTGAC GATCCCCGCG GGCGGCGCGG TGCCGGTGAG CTGGGCGATC 
ACCGCGCCCG ATCAGGCGGG GCCGCTGAGC TGGACCGTCG AAGCGGCGAC AAGGGACGGC 
AAGGCGCGCG ACCGCCTCGT CTTCGAACAG ATCGTCGAAC CCGCGGTGCC GGTCGAAACC 
TGGGCCGCCA GCCTCTTCCG CGTCGGACCG GCCACGACCT TGCCCATCGC GATTCCCGCA 
GGCGCGCTGC CCGGCGGCTA TGTCGATGTC GCGCTCGCGG GCACGCTCGC GCCGCCGCTC 
GCGGGGGTGC GCGACTATAT GGCCGCCTAT CCCTACACCT GTTTCGAACA ACAGACGTCG 
CGCGCCGTCG CGCTCGGCGA CCTTGGGCGG TGGCAGGCGC TGGCGGGTGC GATGCCGACC 
TATCTCGATG ACGACGGGCT GCTGCGCTAC TGGCCCAACG AGCGGATGGA AGGGTCGATC 
GAGCTCACCG CCTATGTCCT CGGCATCAGC GCGGCGAACG GCTTTGCGAT CCCCGAAACC 
TCGCGGGCAA AGATGATCGC CGCGCTGCAA GCGGTGGTCG AGGGGCGGCT GGCGCGCCGC 
GGCTATGGCC CGTGGGACAT TCGCCCCGTG CGCGTCGCCG CGCTCGCCGC GCTCGCGCGC 
GCCAATGCCG CGAACGCGCG CCTCGTCGCC GCAATCGACA TGGCGCCCGC CGACATGACG 
ACGGGCACGC TCGCCGACTG GCTCGTCGCG ATCGAACGGA CGCCCGGCGT GCGGGGCGCC 
GCCGCGCTGC GCACCGCGGC CGAGGCCGAG CTTCGCAAGC GCCTCGTTTA CGAAGGCACA 
CGCCTCGACC TCGTCGACGA TGCGCGCGCG CCATGGTGGA TGATGGTCAG CGGCGACGAA 
ATGGCGATCA AGGCGCTGGG CGCCGTCCTC GGCCGCAAGG GATGGGAGGA TGACGCGGGC 
AAGCTGATGG TCGGCGTCGC CCAGCGCCAG CGCAAGGGGC ATTGGGACAC GACTCCCGCA 
AACGCATGGG GCGCGGTCAC CGTCCGCCGC TTTGCCGAGC TTTATCCGGC GAGCGCGATC 
ACCGGCGTCA CGACCATCGG CCTTGCGGGC AATACCGCTT CGCAAAGCTG GCCGCTCCCC 
GCTGAGCCGC CCTCGCCGCT TCGCGTCGCG CTCAATGCCG CGACGATGAG CCTCAATCAT 
CGGGGCACGG GATCGCCATG GGCGACCGTC AGCGTCAAGG CCGCGGTGCC TTTGAAGGAG 
CCGCTCAATG CGGGCTACCG GATCAAACGC TCGGTGAGCA TCGTCAAGGC GGCGAACAAG 
GACCGGCTGA CGCGCGGCGA CGTCATCAAG ATACGGATCG AGGTCGCCGC CGCCGCGGGC 
CGGACGTGGG TGGTCATCAG CGATCCCGTC GCCCCCGGCG CGACGATCGT CGGCAATCTC 
GGCGGCCAGT CCGAAATGCT GGGCGCGCAA GCGGGCGGAT CGGGCGCGCA GCCCAGCTAT 
GTCGAGCGCG GCAAGGACAG CTGGCGCGGC TATTTCGGCT GGATGCCCGC GGGCACCCAC 
GCGGTCGAAT ATGTCGTCCG CCTCAATGGC TCGGGCCGCT TCACCCTGCC CCCGACGCGC 
GTCGAGGCGA TGTATTCGCC CGCGATCCGC GGCCAATGGC CGAACGCGCC GCTGACCGTG 
GCGAATGTGG GGTCGTGA 

 

Protein sequence

MPLTLAIAAT AADTVPQVIL ATPGSSGTGE GTVTRFTLRF SEDMVALGDP RAAAPATNDC 
KRPSTARWVD TRTWVLEFDA PLPGGLRCHV ELRSGLVTAR GVAVTGNDRF AIDTGGPSAR 
AVLAGGIGGG IEEEQVFLVA TNVAADRASV ARYGYCAVDG IGEKIPLDVL PRATATEILT 
GLGDANWSRQ SFTYDAGLPQ RLPAAGAERD AALGRIVAVK CRRPLPPGRD MALVWDARIS 
QAGVPGRTAG RDQRFDYDVR PAFTAKMTCS RVNPQAGCNP IKDVVLRFTA PVARDTALAA 
KLTTADGQTI AAKFDDDDRG DTHLTQVRFA GPLPQNVDAA LILPADVTDQ SGRALLNASN 
FPLDFHIDRT PPLVKFAAEF GILEASEGGV LPVTVRGVEA SLVQKNLKMP AATLRIGDDD 
AAVARWLRRV ADADDSDYRE EKDAAGKEIT VNYTGTKSLF DGAPPGGERR DMQLTPPAGG 
KEFEVVGIPL AEKGFHIVEV ASPELGAALL GRKATRYVAT AALVTDMAVH FKWGRDGSLA 
WVTSLATGKP VAGAEIRVSD SCTGRLLARG TADKAGRLAF PSGLPQPETY SNCEDDADPT 
NSEGHALMVS ARSGDDFSFT LTDWGDGIRP YDFDLPYGWS EREDILHTVF DRALVQAGET 
VHMKHVLRRP VGLGFRTPEP LAGKLRLVHR GSDTEFEMPF AIAATGSGES VWNVPQSAPM 
GDYELVFVTT DKKGEDRSIW TGQSVRVDEY RLPTMKAAIT GPKGALVRPA AVPLSLFVGY 
LSGGPAPGIP VELRTSFRAA WSPPEDYRDW DFDGRPVREG TVQLDDSGEE PGGDLPLARS 
VPLTLGADGT ASTSVIVDQP ISEPTVMAAE MDYADANGET LTASRRITLY PSAVRLGLRT 
DGWMMRDDDL RLNFIALDLG GKPIRGQRVD VALYSRQIIT ARRRLIGGFY AYDNQMRTAK 
LSANCTATTD RLGRASCAMA PGVSGEVTVV ATTHDADGNE ARAVRSVWLA GDDEWWFGGD 
NGDRMDVIAE APRYAAGDTA RFQVRMPFRE ATALVTVERE GVLSSFVVPL KGTNPVVTVK 
LPATYAPDVY VSVMAVRGRV TGQESWFRKM KRAVGFQIET SEGAPPTALV DLAKPAYRIG 
IARIKVGWEG HKLDVKVRAD KEKYAVRETA KVGIEVKAPG GKAPKNADVA FAAVDEALLQ 
LAPNESWDIL AAMMGDRTLD VLTSTAQMQV VGKRHYGRKA LEPGGGGGGD LSGLTREDFR 
PVLLWKGTVP LDARGRASID VPLSDNLSGF RLVAIATDGS QFFGTGETSV RTVQDLGVFA 
GLPELVRTGD AYDARFTLRN GTDKPMEVTA TATISPAIAT APPLTVTIPA GGAVPVSWAI 
TAPDQAGPLS WTVEAATRDG KARDRLVFEQ IVEPAVPVET WAASLFRVGP ATTLPIAIPA 
GALPGGYVDV ALAGTLAPPL AGVRDYMAAY PYTCFEQQTS RAVALGDLGR WQALAGAMPT 
YLDDDGLLRY WPNERMEGSI ELTAYVLGIS AANGFAIPET SRAKMIAALQ AVVEGRLARR 
GYGPWDIRPV RVAALAALAR ANAANARLVA AIDMAPADMT TGTLADWLVA IERTPGVRGA 
AALRTAAEAE LRKRLVYEGT RLDLVDDARA PWWMMVSGDE MAIKALGAVL GRKGWEDDAG 
KLMVGVAQRQ RKGHWDTTPA NAWGAVTVRR FAELYPASAI TGVTTIGLAG NTASQSWPLP 
AEPPSPLRVA LNAATMSLNH RGTGSPWATV SVKAAVPLKE PLNAGYRIKR SVSIVKAANK 
DRLTRGDVIK IRIEVAAAAG RTWVVISDPV APGATIVGNL GGQSEMLGAQ AGGSGAQPSY 
VERGKDSWRG YFGWMPAGTH AVEYVVRLNG SGRFTLPPTR VEAMYSPAIR GQWPNAPLTV 
ANVGS