Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2381 |
Symbol | |
ID | 4080821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2503973 |
End bp | 2504350 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010761 |
Product | histidine triad (HIT) protein |
Protein accession | YP_617423 |
Protein GI | 103487862 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.116169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATCG ACGCCACCCT CCCCTATGAC GACAGCAACA TCTTCGCGCG CATCCTGCGC GGTGAGCTGC CGGCGAAGAC CGTCTATGAC GACGAATATG CCCTCGCCTT CCACGACATC AACCCGCAGG CGCCGCTGCA CATCCTCGTC ATCCCCAAGG GCGCCTATGT CAGCTGGGAC GATTTTTCGG AGCGCGGCAG CGACGCCGAA ATCGCGGGCT TCGTCCGCGC GGTGGGCCGC GTCGCGCGCG ACCAGGGCCT CGTCGCCCCC GGCTATCGCC TGCTCGCCAA CGTCGGGCCC GACAGCCATC AGGAGGTGCC GCACCTCCAC GTCCACATCT TCGCCGGCCG CCCGCTCGGC CCGATGCTCG CGCGATAG
|
Protein sequence | MPIDATLPYD DSNIFARILR GELPAKTVYD DEYALAFHDI NPQAPLHILV IPKGAYVSWD DFSERGSDAE IAGFVRAVGR VARDQGLVAP GYRLLANVGP DSHQEVPHLH VHIFAGRPLG PMLAR
|
| |