Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2378 |
Symbol | |
ID | 4080818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2499373 |
End bp | 2500077 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010758 |
Product | uracil-DNA glycosylase |
Protein accession | YP_617420 |
Protein GI | 103487859 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.155716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0973542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG TCAAACTGCA TCCCGACTGG CTCGCGCGCA TCGGCGGCGA GTTTGCGCAG CCCTATATGG CGGCGCTCAA GCAGTTCCTC GCCGACGAGC GCGCGAAGGG CAAGACCATC TATCCGCGCC CGCGCGACTG GTTCGCGGCA TTGGACGCGA CGCCGCCGGA CGCGGTGCGC GTCGTGATTT TGGGGCAGGA CCCCTATCAC GGGCCGGGGC AGGCGCATGG GCTTTGCTTT TCGGTCCAGC CCGGCGTGCG CCTGCCGCCG AGCCTGGTCA ACATCTACAA GGAATTGCGC AGCGACCTGG GTATCGCACC CGCGCCGCAC GGCCACCTGG CGCATTGGGC ACGGCAGGGG GTGCTGCTGC TCAACAATTG CCTGACGGTC GAGGCGGGGC AAGCGGCGTC GCATCAGGGC AAGGGATGGG AAAAGTTCAC CGACGCCGCG GTCGCCGCGG TCGCCGCCGA CCCGGCGCCC AAGGTGTTCA TCCTGTGGGG CAGCCATGCG CAGAAGAAGG CGGCGAATGT GCCGGGGCTG GGCGCGGGCA GTCCGCACCT GATTCTGCGC GCGCCGCACC CCTCGCCATT GTCGGCGCAT AACGGCTTTT TCGGGTCGCG GCCGTTCAGC CAGGCCAATG CCTTTCTGGA GGCGCAGGGG CGCGGCGCGA TCGACTGGCG GCTGCCCGAC GATCCCGGCG CATGA
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Protein sequence | MAEVKLHPDW LARIGGEFAQ PYMAALKQFL ADERAKGKTI YPRPRDWFAA LDATPPDAVR VVILGQDPYH GPGQAHGLCF SVQPGVRLPP SLVNIYKELR SDLGIAPAPH GHLAHWARQG VLLLNNCLTV EAGQAASHQG KGWEKFTDAA VAAVAADPAP KVFILWGSHA QKKAANVPGL GAGSPHLILR APHPSPLSAH NGFFGSRPFS QANAFLEAQG RGAIDWRLPD DPGA
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