Gene Sala_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2378 
Symbol 
ID4080818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2499373 
End bp2500077 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID638010758 
Producturacil-DNA glycosylase 
Protein accessionYP_617420 
Protein GI103487859 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.155716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0973542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG TCAAACTGCA TCCCGACTGG CTCGCGCGCA TCGGCGGCGA GTTTGCGCAG 
CCCTATATGG CGGCGCTCAA GCAGTTCCTC GCCGACGAGC GCGCGAAGGG CAAGACCATC
TATCCGCGCC CGCGCGACTG GTTCGCGGCA TTGGACGCGA CGCCGCCGGA CGCGGTGCGC
GTCGTGATTT TGGGGCAGGA CCCCTATCAC GGGCCGGGGC AGGCGCATGG GCTTTGCTTT
TCGGTCCAGC CCGGCGTGCG CCTGCCGCCG AGCCTGGTCA ACATCTACAA GGAATTGCGC
AGCGACCTGG GTATCGCACC CGCGCCGCAC GGCCACCTGG CGCATTGGGC ACGGCAGGGG
GTGCTGCTGC TCAACAATTG CCTGACGGTC GAGGCGGGGC AAGCGGCGTC GCATCAGGGC
AAGGGATGGG AAAAGTTCAC CGACGCCGCG GTCGCCGCGG TCGCCGCCGA CCCGGCGCCC
AAGGTGTTCA TCCTGTGGGG CAGCCATGCG CAGAAGAAGG CGGCGAATGT GCCGGGGCTG
GGCGCGGGCA GTCCGCACCT GATTCTGCGC GCGCCGCACC CCTCGCCATT GTCGGCGCAT
AACGGCTTTT TCGGGTCGCG GCCGTTCAGC CAGGCCAATG CCTTTCTGGA GGCGCAGGGG
CGCGGCGCGA TCGACTGGCG GCTGCCCGAC GATCCCGGCG CATGA
 
Protein sequence
MAEVKLHPDW LARIGGEFAQ PYMAALKQFL ADERAKGKTI YPRPRDWFAA LDATPPDAVR 
VVILGQDPYH GPGQAHGLCF SVQPGVRLPP SLVNIYKELR SDLGIAPAPH GHLAHWARQG
VLLLNNCLTV EAGQAASHQG KGWEKFTDAA VAAVAADPAP KVFILWGSHA QKKAANVPGL
GAGSPHLILR APHPSPLSAH NGFFGSRPFS QANAFLEAQG RGAIDWRLPD DPGA