| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2370 |
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| Symbol | |
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| ID | 4080810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2492752 |
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| End bp | 2494644 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010750 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_617412 |
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| Protein GI | 103487851 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.211689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA TCGACAGCCG CCTCGACACG ACGCAAGCCA CCCCCATCGG CGTCACCACC
GGGCCGATCC GCGGCAGCCG CAAGATCCAC GTCGCCAGCC CCACCGGCAG CGGCATCCGC
GTCGCGATGC GCGAGATCCT GCTCGAACCC TCATCGGGCG AACCGCCGGT GCGCGTCTAC
GACACCAGCG GGCCTTATAC GGACCCCGAT GCGACGATCG ACATCGCCCA GGGCCTCCCC
GAACTGCGGG CAAGCTGGAT CCGCGCCCGC GGCGACGTCG AAGAGGTGGC CCAGCGCGAG
GTTCGGCCGG AGGACAACGG CCAGCTCGGC CCCGACCGTT CGGGCGGCGT CCCCGCCTTC
CCCAATGTCC GCAAGAAAGT GCTGCGCGCC AAGCCCGGCG CGAACGTCAG CCAGATGCAC
TATGCCCGCC GCGGCATCAT CACGCCCGAG ATGGAATATG TCGCGACGCG CGAGAATCTC
GGCCGCGAAC GGCTCGCCGA ATATGTCCGC GACGGGCAGG ACTGGGGCGC CAGCATCCCC
GACTATGTCA CCCCCGAATT CGTCCGCGAC GAGGTCGCGC GCGGCCGCGC GATCATCCCC
AGCAACATCA ACCACCCCGA AAGCGAGCCG ATGGCGATCG GCCGCAACTT CCTCGTCAAG
ATCAACGCCA ATATCGGCAA CAGCGCGGTC GCCAGCGACG TCGCGGCCGA GGTCGACAAG
ATGGTCTGGT CGATCCGCTG GGGCGCCGAC ACCGTCATGG ACCTGTCGAC CGGGCGCAAC
ATCCACGACA CGCGCGAATG GATCCTCCGC AACTCGCCCG TCCCGATCGG CACCGTCCCC
ATCTATCAGG CGCTCGAAAA GGTCGGCGGC ATCGCCGAGG AACTGACGTG GGAAATCTTC
CGCGACACGC TGATCGAACA GGCCGAACAG GGCGTCGACT ATTTCACCAT CCATGCGGGT
GTCCGTCTGC CTTACGTGCC CCTCGCCGCG AAGCGCGTCA CCGGCATCGT CAGCCGCGGC
GGCAGCATCA TGGCGAAATG GTGCCTCGCG CATCACAGGG AAAGCTTCCT CTACGACCAT
TTCGACGAGA TTACCGAGAT CATGAAGGCC TATGACATCG CCTACAGCCT CGGCGACGGC
CTGCGCCCCG GCAGCATCGC CGACGCGAAT GACGAGGCGC AGTTTGCCGA GCTCTACACG
CTGGGCGAGC TTACCAGGCG CGCGTGGGCA CAGGATGTGC AGGTGATGAT CGAGGGACCG
GGGCATGTTC CCATGCACAA GATCAAGGAG AATATGGACA AGCAGCTCGA GGCCTGCGGC
GAGGCGCCCT TCTACACCCT GGGGCCGCTC ACCACCGACA TCGCGCCCGG CTACGACCAT
ATCACCAGCG GCATCGGCGC CGCGATGATC GGCTGGTACG GCACCGCGAT GCTTTGCTAC
GTCACGCCCA AGGAGCATCT GGGCCTGCCC GACCGCGACG ATGTGAAGGT CGGCGTCGTC
ACCTACAAGC TCGCCGCCCA CGCCGCCGAC CTCGCCAAGG GCCACCCCGC CGCGCAGGTC
CGCGACGATG CGCTGTCAAA GGCGCGCTTC GAGTTCCGCT GGCGCGACCA GTTCAACCTG
TCGCTCGACC CCGACACCGC CGAGCAATAT CACGACCAGA CCCTCCCCGC CGAGGGCGCC
AAGACCGCGC ATTTCTGCAG CATGTGCGGG CCGAAGTTCT GCTCGATGAA GATCAGCCAG
GAGGTGCGCG AGTTCGCGAA GCTGCAAAAT CAGGACAGCG CCGGTTTCAT CGCGGCAGAA
GAGGCCGAAA AGGGCATGGC GGAAATGAGT CAGGTCTATG AGGACACGGG GCGCGAGCTG
TATATGGGCG CTGGTGGGCG CGAGCATGAT TGA
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| Protein sequence | MADIDSRLDT TQATPIGVTT GPIRGSRKIH VASPTGSGIR VAMREILLEP SSGEPPVRVY
DTSGPYTDPD ATIDIAQGLP ELRASWIRAR GDVEEVAQRE VRPEDNGQLG PDRSGGVPAF
PNVRKKVLRA KPGANVSQMH YARRGIITPE MEYVATRENL GRERLAEYVR DGQDWGASIP
DYVTPEFVRD EVARGRAIIP SNINHPESEP MAIGRNFLVK INANIGNSAV ASDVAAEVDK
MVWSIRWGAD TVMDLSTGRN IHDTREWILR NSPVPIGTVP IYQALEKVGG IAEELTWEIF
RDTLIEQAEQ GVDYFTIHAG VRLPYVPLAA KRVTGIVSRG GSIMAKWCLA HHRESFLYDH
FDEITEIMKA YDIAYSLGDG LRPGSIADAN DEAQFAELYT LGELTRRAWA QDVQVMIEGP
GHVPMHKIKE NMDKQLEACG EAPFYTLGPL TTDIAPGYDH ITSGIGAAMI GWYGTAMLCY
VTPKEHLGLP DRDDVKVGVV TYKLAAHAAD LAKGHPAAQV RDDALSKARF EFRWRDQFNL
SLDPDTAEQY HDQTLPAEGA KTAHFCSMCG PKFCSMKISQ EVREFAKLQN QDSAGFIAAE
EAEKGMAEMS QVYEDTGREL YMGAGGREHD
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