| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2368 |
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| Symbol | |
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| ID | 4080807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2491350 |
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| End bp | 2492045 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638010748 |
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| Product | helix-turn-helix, type 11 |
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| Protein accession | YP_617410 |
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| Protein GI | 103487849 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.150063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AGACGGGGCG GCTTTTCGCG ATCATCGACA GTTTGCGCCG CCGCCGACGG
CCGGTAACGG CAGAGATGCT CGCCGAAGAG CAGGGCGTGT CGGTGCGCAC GCTCTATCGC
GACATCCAGG CGCTGATCGC GCTGGGCGCG CCGATCGAGG GCGCGGCGGG GGTCGGCTAT
ATGCTGCGAC CGGGATTCTT CCTGCCGCCG CTGATGTTCA CCGCCGAGGA ACTGGAGGCG
CTGGTGCTGG GCGCGCGCTG GGTCGAGGGG CGGCAGGACG GATCGCTGTC GCGGGCCGCG
GGGCTGGCGC TCGCGAAGAT CGCGGCGGCG AGCCCCGACG AACTGAAGCA GCGAATCGAC
GAGGCGGGGC TGTGGCCGGT CAGCAGCCGC TGGCGCGAAA GCGATGCGCC GTTGCTGGCG
ACGGTGCGCG CGGCGATGCG GTCCGAAAGG ACGCTGCATA TCGACTATGC CGACGAGCAG
GGGCGGACAA GCGAACGCGC GATCTGGCCC GCGGCGCTCG CCTATTTCGA GGAGAAGCAG
GTCATCGCCG CCTGGTGCCT GCTGCGGCAG GATTTCCGCA GCTTTCGCAT CGACCGCATC
GCCGCGGCGC GGATCGGCGA CGAAGGATTC GGGCGGCGGC GCGCGGTGCT GATGGCCGAC
TGGTGGCGTC AGAAGGGGTG GGACGACGCT TCCTGA
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| Protein sequence | MADKTGRLFA IIDSLRRRRR PVTAEMLAEE QGVSVRTLYR DIQALIALGA PIEGAAGVGY
MLRPGFFLPP LMFTAEELEA LVLGARWVEG RQDGSLSRAA GLALAKIAAA SPDELKQRID
EAGLWPVSSR WRESDAPLLA TVRAAMRSER TLHIDYADEQ GRTSERAIWP AALAYFEEKQ
VIAAWCLLRQ DFRSFRIDRI AAARIGDEGF GRRRAVLMAD WWRQKGWDDA S
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