| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2352 |
|---|
| Symbol | |
|---|
| ID | 4080753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2476180 |
|---|
| End bp | 2477190 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010732 |
|---|
| Product | MltA-interacting MipA |
|---|
| Protein accession | YP_617394 |
|---|
| Protein GI | 103487833 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0884587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGC CCCGTCCGAC GCGCCTTCGC TCCATCATGC GCCCGTTGAT TTCGTTTTTC
GCCGCCGCGC TGGCAATCGG CCCGGCTTCC GCCGAGGAAA CGTCGCCCGC TGACGGTCTC
GAAGCAGAGG CGACCATCGC CGCTGCGAAT GGGTTCGACG ACGCCCCGCG CTACCTCCAG
GACAGCGACA TCGACGAAAA TATCCTGCTG CCCGCGGCGC GGCCCGACGA CGACGATCCC
GAACGGACCT GGTCGCGCGA CTATTTCGCG GTCGCCGCGG GCGTGCTCAG CACGCCCGAA
TATAATGGCG CCGACGACCG CCGCCTCGTC CCCGCCATCT ATCTGCGCGG GCGCATCAGC
GGTTATTCCT TCTCGACGCG CGGCACCAAT TTCCAGGTCG ACCTGATCCG TCAGCGGCGC
GGGCAGAAAA CCGACTTCAA GTTCGGCCCG ATCATCAGCC TGCGCAGCGA CCGCACCGGC
AAGATCGACG ATCCGCAGGT TGCGGCGCTC GGCAAGCGCA AGATTGCTGT CGAAACCGGG
CTTTTCGCGG GAGTATCGCA CACCGGCGTC ATCACCAGCG CCTATGACCA GATCGCCTTT
CGCGTCGTGG CGCTCAAGGA TATTTCGGGC CGCCACGGCA GCTGGGCCGC CTCACCGACG
ATCGATTACG GCACCCCGCT GTCGAAGCGC GCCTATGTCG GCGTGTCGGC CTCGGTCAAC
TTCTATGGCA AGGGCTTTGG CCGCTATTAT TACGACATCG ACCCGGCGGA CAGCGCGGCG
AGCGGGCTGC CCGTCTATGA CGGAGCGGGG AAAAAGGCGA CCGCGGGCAA ATATACGTTG
GGGATTGCGG GCGCCTATGC GCTGTCGGGC GATCTGCGCA AGGGTTTCGT CCTGCTCGGC
GGCGCGCAAT ATGGCCGCCT TGGCAAAGGT TTCGCCCGCT CACCGATCGT AGCCGACGTT
GGCGATGCCG ACCAGTGGCT GTTCGGCGGC GGCTTGGCAT ATCAGTTCTG A
|
|---|
| Protein sequence | MSMPRPTRLR SIMRPLISFF AAALAIGPAS AEETSPADGL EAEATIAAAN GFDDAPRYLQ
DSDIDENILL PAARPDDDDP ERTWSRDYFA VAAGVLSTPE YNGADDRRLV PAIYLRGRIS
GYSFSTRGTN FQVDLIRQRR GQKTDFKFGP IISLRSDRTG KIDDPQVAAL GKRKIAVETG
LFAGVSHTGV ITSAYDQIAF RVVALKDISG RHGSWAASPT IDYGTPLSKR AYVGVSASVN
FYGKGFGRYY YDIDPADSAA SGLPVYDGAG KKATAGKYTL GIAGAYALSG DLRKGFVLLG
GAQYGRLGKG FARSPIVADV GDADQWLFGG GLAYQF
|
|---|
| |