| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2345 |
|---|
| Symbol | |
|---|
| ID | 4080592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2472068 |
|---|
| End bp | 2472526 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010725 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617387 |
|---|
| Protein GI | 103487826 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.785933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.151538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGA ACCACGCCGC CCCCGCCTTC GCCGCGATCA TGTTGCTCAC CGGGGTCGGC
ATCCCGATCC TCGCGGCGCT GAACGGGGGG CTTGGCGCGC GGCTTGGCAG CCCGATGGCG
GCGTCGATGA TCCTCTTCGG TCTCGCCTTC CTCATCGCTG CGGCGGGCGC GCTGATGACC
GGCTCGTTCG GCGCGGTGCG CTTCACGGGC GACATCCCCG TACATTTCTA TTTCGGTGGG
CTGTTCGTTG CCTTTTATGT GATCGCCGTG ACCTTCATCG CGCCGCGCTT CGGTGTCGGC
AATGCGATCT TTTTCGTGCT CGTCGGCCAA CTCGTCAGCG CGGCGACGAT CGACCATTTT
GGCCTGTTCG GCGCGATACG CTCGACGATC GACCTGAAAC GGATCGCCGG GATTGCGCTG
ATGATTGCAG GCGTCTGGCT CGCGCGGCGC ACGGGGTGA
|
|---|
| Protein sequence | MTANHAAPAF AAIMLLTGVG IPILAALNGG LGARLGSPMA ASMILFGLAF LIAAAGALMT
GSFGAVRFTG DIPVHFYFGG LFVAFYVIAV TFIAPRFGVG NAIFFVLVGQ LVSAATIDHF
GLFGAIRSTI DLKRIAGIAL MIAGVWLARR TG
|
|---|
| |