Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2342 |
Symbol | |
ID | 4080589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2469687 |
End bp | 2470346 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010722 |
Product | hypothetical protein |
Protein accession | YP_617384 |
Protein GI | 103487823 |
COG category | [S] Function unknown |
COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.25534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGATCG ATTCGCAAGC GATGTCCGAA CGCGCCGACC TTGACCGCAC GATGCGCCAG ATGTGGGCGC GCAGCGGATC GAGCCACGAC CGGGTGGTGC GCGTCCTGCG CTATGGCCTG CCGCTGGTGA TCGGCGTCGT CGCGGCGGTG CTGGTCTTTT CGCCCTTCAC CCAGCGCGCC GAGATCAGCT TCCTGCTCGC CAAGGACAAG GTCGACATGG CGAGCGAGCG AATGAAGGTG ACGCGGGCCG AATATCGCGG GCAGGATGCC AAGGGGCAGC CGTTCGCGCT GCTCGCGGGC AGCGCGGTGC AGAAAAGCTC GGCCGAACCG ATCGTGCGGA TGACCGACCT GTCGGGTGCG ATCCGCCTCG CCGACGGCCT CGCGACGATC GTTGCCCAAA GCGGCGCCTA TAATATGGAA ACCGAAAGGG TCGTGGTGCC CGGCACGGTG CGGGTACGCA GCGCCAACGG ATACCGGCTC GACGCAAGCA ATGTCGCGGT CGACCTGAAC ACCCGCCGTC TGATCGGAAC GGGCGGCGTC GAAGGTGCAT TGAACATCGG GCAATTTTCG GCCAACGCGC TGTCCGCCGA CCTCGACAAG CGGATTGTCC GGCTGGAGGG CAATGCCCGG CTGCGGATCA ACCAGGGAGC GATCAAATGA
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Protein sequence | MRIDSQAMSE RADLDRTMRQ MWARSGSSHD RVVRVLRYGL PLVIGVVAAV LVFSPFTQRA EISFLLAKDK VDMASERMKV TRAEYRGQDA KGQPFALLAG SAVQKSSAEP IVRMTDLSGA IRLADGLATI VAQSGAYNME TERVVVPGTV RVRSANGYRL DASNVAVDLN TRRLIGTGGV EGALNIGQFS ANALSADLDK RIVRLEGNAR LRINQGAIK
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