Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2337 |
Symbol | |
ID | 4080584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2465481 |
End bp | 2465984 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638010717 |
Product | protein tyrosine phosphatase |
Protein accession | YP_617379 |
Protein GI | 103487818 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.441606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGGG GGCTTGGCGT GCTGGTGCTC TGCACCGGCA ATTCGGCGCG CAGCATCTTG GGCGAGGCGC TGGTCGGGCG CATGGGCGAA GGGCGGCTCA CTGCGTTCAG CGCGGGGAGC AAGCCGAGGG GTGCACCGCA CCCCGCGGCG CTCCGCCTGC TCCGCGCAAA GGGTTTTGAC GTGGCAGCGT TCCGCTCGAA AAGCTGGGAC GAATTCGCCG CGCCGGGCGC GCCCCGCATC GACATCGCGA TCACCGTGTG CGGCAATGCG GCGGGCGAGG CGTGCCCGCT GTTCACCGGC GCGCCGGTGC GCGCGCATTG GGGGCTTGCC GACCCCGCCG ATGCGCCGGG CGGCGCGGCG GCCGAGGATG CGGCCTTCGC CGAAACCTGG CGGCTGCTCG AAATGCGCGT CGCGGCGATG CTCGCGCTGC CGCTCGAAAC CATGACGGCG GCCGAGCGGC GCGCCACGCT GAACGCAATC GGACAGATGG AGGGCGCGGC GTGA
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Protein sequence | MTGGLGVLVL CTGNSARSIL GEALVGRMGE GRLTAFSAGS KPRGAPHPAA LRLLRAKGFD VAAFRSKSWD EFAAPGAPRI DIAITVCGNA AGEACPLFTG APVRAHWGLA DPADAPGGAA AEDAAFAETW RLLEMRVAAM LALPLETMTA AERRATLNAI GQMEGAA
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