Gene Sala_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2337 
Symbol 
ID4080584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2465481 
End bp2465984 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content73% 
IMG OID638010717 
Productprotein tyrosine phosphatase 
Protein accessionYP_617379 
Protein GI103487818 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.441606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGG GGCTTGGCGT GCTGGTGCTC TGCACCGGCA ATTCGGCGCG CAGCATCTTG 
GGCGAGGCGC TGGTCGGGCG CATGGGCGAA GGGCGGCTCA CTGCGTTCAG CGCGGGGAGC
AAGCCGAGGG GTGCACCGCA CCCCGCGGCG CTCCGCCTGC TCCGCGCAAA GGGTTTTGAC
GTGGCAGCGT TCCGCTCGAA AAGCTGGGAC GAATTCGCCG CGCCGGGCGC GCCCCGCATC
GACATCGCGA TCACCGTGTG CGGCAATGCG GCGGGCGAGG CGTGCCCGCT GTTCACCGGC
GCGCCGGTGC GCGCGCATTG GGGGCTTGCC GACCCCGCCG ATGCGCCGGG CGGCGCGGCG
GCCGAGGATG CGGCCTTCGC CGAAACCTGG CGGCTGCTCG AAATGCGCGT CGCGGCGATG
CTCGCGCTGC CGCTCGAAAC CATGACGGCG GCCGAGCGGC GCGCCACGCT GAACGCAATC
GGACAGATGG AGGGCGCGGC GTGA
 
Protein sequence
MTGGLGVLVL CTGNSARSIL GEALVGRMGE GRLTAFSAGS KPRGAPHPAA LRLLRAKGFD 
VAAFRSKSWD EFAAPGAPRI DIAITVCGNA AGEACPLFTG APVRAHWGLA DPADAPGGAA
AEDAAFAETW RLLEMRVAAM LALPLETMTA AERRATLNAI GQMEGAA