| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2331 |
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| Symbol | |
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| ID | 4080578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2459232 |
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| End bp | 2460818 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010711 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_617373 |
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| Protein GI | 103487812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.745478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGT TCGACATCAT CGTCATCGGC GGCGGCAGCG CGGGGAGCGC GGCGGCCGGG
CGGCTCGCCG AGGACGGGGC GCGCACCGTC TGTTTGGTCG AAGCGGGCGG GACGAACGAC
ATCGTGCGGG TGAAGACACC GGGTTTCATG CCCTTCATCC CCAAATCGTC GAACTGGCGA
TATGACACCG TGCCGCAACA GGGACTGAAC GGCCGCATCG GATATCAGCC GCGCGGGCGC
GGGCTGGGCG GGTCGAGCGC GATCAACGCG ATGGTCTATA TCCGGGGGCA CGCCTTCGAT
TACGACCAGT GGGCGGCGCT GGGCGCGACC GGCTGGAGCT ATGCCGACGT GCTGCCTTAT
TTCAAGCGCA GCGAGGGCAA TGAGCGCGGC GGTGACGAGT TTCACGGCGG GGACGGGCCG
CTGAATGTGA TGGACCAGCG CTGGCCCAAT GTGACGAGTC GACGCTTCGT CGAGAGCGCG
ACGGCGCTGC AATTGCCGCG CACTGCTGAT TTCAACGGCC CTGACAATGA AGGCTTCGGC
CTCTATCAGG TGACGCAGAA AGGCGGCGAG CGCTGGTCGG CGGCGCGCGC CTATGTCGAG
CCGCTGCGCG GGCGATCGAA CTTCGACATC CGCACCGGCG CGCTGGTCGA GAAGATTTTG
ATCGAGGAGG GGCGCGCGGT CGGTGTCACG ATCCGCTGCG GGCGCCGCCG CGAGACGCTG
CGCGCACGGG GTGGGGTCGT GTTGTCGGCG GGGGCGTTCG GCAGTCCGCA GATATTGATG
CTGTCGGGGA TCGGGCCCGG CGCGCATTTG CAGGAGATGG GGATTGCCGT CGCGCGCGAC
CATGCCGGGG TCGGCGACAA TCTGCAGGAC CATATCGATT ATGTGTCGAG CTGGGAAACG
CGCTCGACCG ATCCCTTCGG CGACAGTTTC GGTGGCACCT GGCGGATGGT GAAGGCGATC
GTCGAGCATC GCCGCCGCCG GACGGGGATC ATGACGACCT GTTTCGCCGA AGCGGGGGGA
TTCTGGAAAT CGCGCCCCGA CCTGCCTGCG CCCGACGTGC AGTATCATTT CGTGCCCGCG
ATGCTCGAGG ATCATGGCCG CACCAAGGTC AAGGGGCACG GCTTTTCGTG CCACGCCTGC
GTGCTGCGGC CTGAAAGCAG AGGCACGGTG CGGCTGGCGT CCTCCGATGC CGCGGCGGCA
CCGACGATCG ACCCCGGTTT TTTGACCGAC GAGCGCGACA TGGCGACGCT TCGCGCCGGG
GTGCGGATGA TGCACCGCAT CGTCGCGGCG CCGCCGCTCG CCGATTATGC GGGGGTCGAC
CGCCATCCGG TGAACCTCGA TGACGATGCC GCGCTCGACG CGCTGATCCG CAGCCGCGCC
GACACCGTCT ATCATCCCGT CGGCACGTGC CGGATGGGCA GCGATGCCGA TGCGGTGGTC
GATCCGACAC TGAAGCTCAA CGGCATCGAC GGGCTGTGGG TTGCCGATGC GAGCATCATG
CCACGACTGG TCAGCGGCAA CACCAACGCG CCGAGCATCA TGATCGGCGA AAGGGCAGCG
GATTTCGTGA AGGCGGCTTT GAGTTAA
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| Protein sequence | MDQFDIIVIG GGSAGSAAAG RLAEDGARTV CLVEAGGTND IVRVKTPGFM PFIPKSSNWR
YDTVPQQGLN GRIGYQPRGR GLGGSSAINA MVYIRGHAFD YDQWAALGAT GWSYADVLPY
FKRSEGNERG GDEFHGGDGP LNVMDQRWPN VTSRRFVESA TALQLPRTAD FNGPDNEGFG
LYQVTQKGGE RWSAARAYVE PLRGRSNFDI RTGALVEKIL IEEGRAVGVT IRCGRRRETL
RARGGVVLSA GAFGSPQILM LSGIGPGAHL QEMGIAVARD HAGVGDNLQD HIDYVSSWET
RSTDPFGDSF GGTWRMVKAI VEHRRRRTGI MTTCFAEAGG FWKSRPDLPA PDVQYHFVPA
MLEDHGRTKV KGHGFSCHAC VLRPESRGTV RLASSDAAAA PTIDPGFLTD ERDMATLRAG
VRMMHRIVAA PPLADYAGVD RHPVNLDDDA ALDALIRSRA DTVYHPVGTC RMGSDADAVV
DPTLKLNGID GLWVADASIM PRLVSGNTNA PSIMIGERAA DFVKAALS
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