Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2325 |
Symbol | |
ID | 4080610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2452223 |
End bp | 2452918 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010705 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_617367 |
Protein GI | 103487806 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.415298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGG TCGCCAGTTA CAATATGCGC AAGGGCATCG GGCTCGACCG TCGCCGCGAT CCCGGCCGCG TGCTGGCGGT GCTGCGCGAA CTCGACGCCG ACATCGTCGC GTTGCAGGAG GCCGATCGCC GCTTCGGCAC GCGCGCGAGC GCGATCCCGC CGCACATGTT CGAGGAGCAT AGCGATTATG TGCCCGTCGA CCTGCTCCAC GGTCGTCCCT ATGCGATCGG CTGGCACGGC AATGCGCTGC TCGTGCGCAA GGGCGCCGAG GTCGAGGAAA GCCATGCGCT CCACCTGCCG ACGCTCGAAC CGAGGGGCGC GGTCGCCGCG ACGGTGCGGA TCGGCGACAC GCGGCTGCGC GTCGTCGGCA TGCACCTCGA CATTTCGGGG CTGCGGCGCC GCCAGCAGGC GCGGGCGATC CTGCACCACA TCGCCGAGGG CGAAAAACTG CCGACGATCC TGATGGGCGA CTGCAACGAA TGGCGGCAAA CGGGCGGTTG CCTCGCCGAT TTCGGCGCCG AGCATCGGCT CGTCGACACG GGGCACAGCT TTCACAGCCG CCGCCCGGTC GCCAAGCTCG ACCGCATTTT CGCCTCACCC GACCTCGATC CGGTCGATGC CGGCGTCCAC CGCAGCGCCC TCGCCGCGCG CGCGTCGGAT CATCTGCCGA TCTGGGCGCG GTTTAGAGCG CGATGA
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Protein sequence | MIKVASYNMR KGIGLDRRRD PGRVLAVLRE LDADIVALQE ADRRFGTRAS AIPPHMFEEH SDYVPVDLLH GRPYAIGWHG NALLVRKGAE VEESHALHLP TLEPRGAVAA TVRIGDTRLR VVGMHLDISG LRRRQQARAI LHHIAEGEKL PTILMGDCNE WRQTGGCLAD FGAEHRLVDT GHSFHSRRPV AKLDRIFASP DLDPVDAGVH RSALAARASD HLPIWARFRA R
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