Gene Sala_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2325 
Symbol 
ID4080610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2452223 
End bp2452918 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID638010705 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_617367 
Protein GI103487806 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.415298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG TCGCCAGTTA CAATATGCGC AAGGGCATCG GGCTCGACCG TCGCCGCGAT 
CCCGGCCGCG TGCTGGCGGT GCTGCGCGAA CTCGACGCCG ACATCGTCGC GTTGCAGGAG
GCCGATCGCC GCTTCGGCAC GCGCGCGAGC GCGATCCCGC CGCACATGTT CGAGGAGCAT
AGCGATTATG TGCCCGTCGA CCTGCTCCAC GGTCGTCCCT ATGCGATCGG CTGGCACGGC
AATGCGCTGC TCGTGCGCAA GGGCGCCGAG GTCGAGGAAA GCCATGCGCT CCACCTGCCG
ACGCTCGAAC CGAGGGGCGC GGTCGCCGCG ACGGTGCGGA TCGGCGACAC GCGGCTGCGC
GTCGTCGGCA TGCACCTCGA CATTTCGGGG CTGCGGCGCC GCCAGCAGGC GCGGGCGATC
CTGCACCACA TCGCCGAGGG CGAAAAACTG CCGACGATCC TGATGGGCGA CTGCAACGAA
TGGCGGCAAA CGGGCGGTTG CCTCGCCGAT TTCGGCGCCG AGCATCGGCT CGTCGACACG
GGGCACAGCT TTCACAGCCG CCGCCCGGTC GCCAAGCTCG ACCGCATTTT CGCCTCACCC
GACCTCGATC CGGTCGATGC CGGCGTCCAC CGCAGCGCCC TCGCCGCGCG CGCGTCGGAT
CATCTGCCGA TCTGGGCGCG GTTTAGAGCG CGATGA
 
Protein sequence
MIKVASYNMR KGIGLDRRRD PGRVLAVLRE LDADIVALQE ADRRFGTRAS AIPPHMFEEH 
SDYVPVDLLH GRPYAIGWHG NALLVRKGAE VEESHALHLP TLEPRGAVAA TVRIGDTRLR
VVGMHLDISG LRRRQQARAI LHHIAEGEKL PTILMGDCNE WRQTGGCLAD FGAEHRLVDT
GHSFHSRRPV AKLDRIFASP DLDPVDAGVH RSALAARASD HLPIWARFRA R