| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2303 |
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| Symbol | |
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| ID | 4080799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2429807 |
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| End bp | 2431639 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010682 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_617345 |
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| Protein GI | 103487784 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0308778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.797114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCC GCAATATCGC CATTATAGCG CACGTCGATC ACGGCAAAAC CACGCTCGTC
GACCAGCTTT TCCGCCAGTC GGGCACCTTT CGCGACAACC AGCGCGTCGA AGAAAGAGCC
ATGGATTCCA ATGACCTGGA GAAAGAGCGC GGGATCACCA TCCTGGCGAA ATGCACCAGC
GTCGAATGGG GCGAGGGCGA TGATGCGACG CGGATCAACA TCGTCGACAC GCCGGGCCAC
GCCGATTTCG GCGGCGAGGT CGAGCGCATC CTGAGCATGG TCGACGGCGT CATCCTGCTC
GTCGACGCCG CCGAAGGGCC GATGCCGCAG ACCAAGTTCG TCACCGGCAA GGCGCTCGCG
CTGGGCCTCA AACCGATCGT CGTCGTCAAC AAGATCGACC GCAGCGACGC GCGCGCCGCC
GAAGTGCTCG ACGAGGTGTT CGAACTGTTC CTGACGCTCG AGGCCAGTGA CGAGCAGCTC
GATTTCCCGA TCCTCTATGC CTCGGGCCGC GGCGGCTATG CCTCGCCCGA CCCCGAAGCG
CGCGACGGCA CGCTGGAGCC GCTGTTCGAA ACGATCGTCC GCCATGTCCC CGCGCCGGGG
CTCGACGAAA ATGCGCCCTT CACCTTCCTC GCGACGCTGC TCGACCGCGA CAATTTCATC
GGCCGGATCC TGACCGGCCG CGTCCAGTCG GGGTCGGTCA AGGTCAACCA GCCGATCCAC
GCGCTCGACA TGGACGGCAA GGTGATCGAA ACCGGTCGCG CGTCGAAACT GCTCGCCTTC
CGCGGGCTCG ACCGCGTCCC CGTCGACGAG GCGAAGGCGG GCGACATCGT CGCGATCGCG
GGGCTGGCGC AGGCGACCGT CGCGAACACC ATCGCCGACA CCAGCGTGAC CGAGCCGATC
GCCGCGCAGC CGATCGACCC GCCGACGCTG TCGATGCGCT TTGCCGTCAA CGATTCGCCG
ATGGCGGGCC GCGAGGGCAG CAAGGTGACG AGCCGCATGA TCCGCGACCG GCTGTACCGC
GAAGCCGAAA CCAATGTCGC GATCCGCATC ACCGAAAGCG CCGACAAGGA CAGTTTCGAG
GTCGCCGGCC GCGGCGAGCT TCAGCTCGGC GTGCTCATCG AAACGATGCG CCGCGAAGGC
TTCGAACTCG GCATCAGCCG CCCGCGCGTC CTCTATCAGA CCGACGAGAG CGGCCAGCGC
ACCGAGCCCT ATGAAACCGT CGTCATCGAC GTCGACGACG AGCATAGCGG CACGGTGGTC
GAGAAGATGC AGCTGCGCAA GGCCGACCTC ACCGACATGC GCCCGTCGGG CGGCGGCAAG
ACGCGCATCA CCTTCAGCGG CCCCTCGCGC GGCCTGATCG GCTATCATGG CGAGTTTCTG
TCGGACACGC GCGGCACCGG CATCATGAAC CGCCTGTTCG AGAAATATGG CCCGTACAAG
GGCGTGATCG AGGGCCGCAA GAATGGCGTC CTCATCTCGA ACGGCAATGG CGAAGCGGTG
GCCTATGCGC TCGGCCCGCT CGAAGAGCGC GGCATCCTCT TCGTCTCGCC CGGCGAGGCG
CTCTATGAGG GGATGATCAT CGGCGAGAAT GCCAAGCCCG AAGACCTTGA GGTCAACCCG
ATGAAGTCGA AACAGCTCAC CAACTTCCGT TCGACGGGCA AGGACGATGC GATCCGCCTG
ACGCCGCCGC GGCGCATGAC GCTCGAACAG GCGATCGCCT ATATCGACGA TGACGAGATG
GTCGAGGTGA CGCCGAAGAA CATCCGCATC CGCAAGGCGA TCCTCGACCC GCACGAGCGC
AAGAAGGCGA GCCGCAAGAA GGAAGCGGCG TAA
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| Protein sequence | MSLRNIAIIA HVDHGKTTLV DQLFRQSGTF RDNQRVEERA MDSNDLEKER GITILAKCTS
VEWGEGDDAT RINIVDTPGH ADFGGEVERI LSMVDGVILL VDAAEGPMPQ TKFVTGKALA
LGLKPIVVVN KIDRSDARAA EVLDEVFELF LTLEASDEQL DFPILYASGR GGYASPDPEA
RDGTLEPLFE TIVRHVPAPG LDENAPFTFL ATLLDRDNFI GRILTGRVQS GSVKVNQPIH
ALDMDGKVIE TGRASKLLAF RGLDRVPVDE AKAGDIVAIA GLAQATVANT IADTSVTEPI
AAQPIDPPTL SMRFAVNDSP MAGREGSKVT SRMIRDRLYR EAETNVAIRI TESADKDSFE
VAGRGELQLG VLIETMRREG FELGISRPRV LYQTDESGQR TEPYETVVID VDDEHSGTVV
EKMQLRKADL TDMRPSGGGK TRITFSGPSR GLIGYHGEFL SDTRGTGIMN RLFEKYGPYK
GVIEGRKNGV LISNGNGEAV AYALGPLEER GILFVSPGEA LYEGMIIGEN AKPEDLEVNP
MKSKQLTNFR STGKDDAIRL TPPRRMTLEQ AIAYIDDDEM VEVTPKNIRI RKAILDPHER
KKASRKKEAA
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