| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2277 |
|---|
| Symbol | |
|---|
| ID | 4080734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2399025 |
|---|
| End bp | 2400407 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010656 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_617319 |
|---|
| Protein GI | 103487758 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAAA TGAGCACGCG CACCGCTTCG GACCGCCACG ATCCCGTCAT CGAACATCGC
GACCAGCTTG CGGCCCCCAT GGCCGACGGC GAAAAGCCCA AGGAGCGCTG GCGCATCGGC
ACCGAGCATG AAAAGTTCGT CTACCGTGTG AGCGATCACC GCGCGCCCTC CTATGACGAA
CCCGGCGGCA TCCACGACCT CCTGATGGCG CTCACCCGCT TCGGCTGGGA GCCGGTGATC
GAGGGCGGCA AGGTCATCGC GCTGGCGGGC AGCGACGGCA CCGTCAGCCT CGAACCCGCG
GGGCAACTCG AACTCTCGGG CGCCCCGCTC GAAAATCTGC ACCAGACCTG CGCCGAAACC
GGCCGCCATC TGAAGCAGGT GAAGGAAGTC GGCGCCGAAC TCGGGCTCGG CTTCCTTGGG
CTCGGCATGT GGCCCGACAA GAGGCGCGAC GAGCTGCCGA TCATGCCCAA GGGGCGCTAC
CGGATCATGC TCGATCATAT GCCGCGCGTC GGCAGCCTCG GCCTCGACAT GATGCTGCGC
ACCTGCACAA TCCAGACCAA CCTCGACTAT GCGAGCGAAG CCGACATGGT GCAGAAGTTC
CGCGTGTCGC TCGCGCTCCA GCCGCTCGCG ACCGCGCTCT TCGCCTCGTC GCCCTTCACC
GAGGGTCGGC CCAACGGCTA TCTGTCGTAC CGCAGCCATA TCTGGACCGA CACCGACCCC
GCGCGCACCG GAATGCTGCC CTTCGTCTTC GAGGATGGTT TCGGCTACGA CCGCTATGTC
GACTATATGC TCGACGTGCC GATGTATTTC GTCTTCCGCG ACGGCCAATA TATCGACGCC
GCCGGCCAGA GCTTCCGCGA CTTTCTGAAG GGCGAGCTGC CGGCGCTCCC CGGCGAACTG
CCGCGCCTGT CCGACTGGAC CGACCATCTC TCGACCGCCT TTCCCGAAGT GCGGCTCAAA
AGCTTCCTCG AAATGCGCGG CGCCGACGGC GGCCCGTGGA ACCGCATCTG CGCGCTTCCG
GCGCTGTGGG TCGGCCTCCT CTACGACCAG GACGCACTCG ACGCCGCCTG GGATCTCGTC
AAGGGGTGGA GCATCGCCGA GCAACAGGCG CTGCGCGACG CAGTGCCGCG CGAAGGGCTC
GACGCGCCCG CGCCCGGCGG CGGCACGGTG GGGCAATTGG CGCACCGCGT GCTCGACATC
GCCGCCGCGG GCCTCGCCGC GCGCGGCGAG GTCAATTCGA TGGGCGACAA TGAAGTCGGT
TTCCTCGAAC CGCTGCGCCG CATCGCGAAA AGCGGCAGAT CCCCCGCGCA CGACCTGCTC
GACCGCTACG AGGATGCGTG GGGCCACGAC CTCTCCCGAA TCTACGACGA GCTGAGCTTC
TGA
|
|---|
| Protein sequence | MREMSTRTAS DRHDPVIEHR DQLAAPMADG EKPKERWRIG TEHEKFVYRV SDHRAPSYDE
PGGIHDLLMA LTRFGWEPVI EGGKVIALAG SDGTVSLEPA GQLELSGAPL ENLHQTCAET
GRHLKQVKEV GAELGLGFLG LGMWPDKRRD ELPIMPKGRY RIMLDHMPRV GSLGLDMMLR
TCTIQTNLDY ASEADMVQKF RVSLALQPLA TALFASSPFT EGRPNGYLSY RSHIWTDTDP
ARTGMLPFVF EDGFGYDRYV DYMLDVPMYF VFRDGQYIDA AGQSFRDFLK GELPALPGEL
PRLSDWTDHL STAFPEVRLK SFLEMRGADG GPWNRICALP ALWVGLLYDQ DALDAAWDLV
KGWSIAEQQA LRDAVPREGL DAPAPGGGTV GQLAHRVLDI AAAGLAARGE VNSMGDNEVG
FLEPLRRIAK SGRSPAHDLL DRYEDAWGHD LSRIYDELSF
|
|---|
| |