Gene Sala_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2272 
Symbol 
ID4080729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2392720 
End bp2393379 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID638010651 
Producthypothetical protein 
Protein accessionYP_617314 
Protein GI103487753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.953892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC CGATCGCTTT CGTCCGCCGG TTGCGCGGCG CCGCGCGGCG GCTGACCCAA 
AGCACGCGCG CCGCGGTGAT GCTCGAAATG GCGTTCGCCA TTCCCTTCCT GATCCTCGTC
GGCTTTGGCG GGCTGGAGAT CGCCAATCTG ACGCTGGCGC ACACGCGCGT CAGCCAGCTG
GGGCTCAACA CCGCGGACAA CGCCGCGCGT ATCGCCGCCG GCAGCAACCT GACCCAGCCG
GAAATCCGCG AGGTCGACAT CAACGAGGTG TTCGCCGGCG CCGCGCGGCA GGTGGCGGGG
ATGGGATTCG AGAACAATGG CCGCATCATC CTGTCCAGCC TCCAGCGCAA CAACGACGGC
GGGCAGACGA TCAAATGGCA GCGCTGTTTC GGCAATCTGG AGGTCGCCTC GGCCTATGGC
GTCGAGGGCA CCGGCGCGAC GGGGACCGAT TTTCCCGGCA TGGGGCCGGC GGGCCGCGAA
GTGACGGCGG CGGCGGGCAC CGCGATCATG TTCGTCGAAG TCACCTATGA ATATCAGCCG
CTGCTGTTCG GCGCCTGGCT GGGGCCGCAG ACCATCCGGT CGACCGCCGC CTATAATATC
CGCGAGGCGC GCGACCTGTC GGGCGTCAAA GCACCGGGCA CGCCCGCCGC CTGCGATTGA
 
Protein sequence
MTGPIAFVRR LRGAARRLTQ STRAAVMLEM AFAIPFLILV GFGGLEIANL TLAHTRVSQL 
GLNTADNAAR IAAGSNLTQP EIREVDINEV FAGAARQVAG MGFENNGRII LSSLQRNNDG
GQTIKWQRCF GNLEVASAYG VEGTGATGTD FPGMGPAGRE VTAAAGTAIM FVEVTYEYQP
LLFGAWLGPQ TIRSTAAYNI REARDLSGVK APGTPAACD