| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2270 |
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| Symbol | |
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| ID | 4080727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2388159 |
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| End bp | 2391602 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638010649 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_617312 |
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| Protein GI | 103487751 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATAA AGCGGCTGCG CCTCACCGGT TTCAAATCTT TCGTCGAACC TACCGAACTG
CGCATCGAGC CCGGCTTGAC CGGCGTCGTC GGCCCCAATG GCTGCGGCAA GTCGAACCTC
CTCGAAGCGA TCCGCTGGGT GATGGGTGAG TCCTCGCCCA AATCGATGCG TGGCGGCGGC
ATGGAGGATG TCATCTTCGC GGGCACCTCG TCGCGGCCCG CGCGCGACTT TGCCGAAGTC
GCGCTCCATT GCGATACCGA AGGCGCGCTC GTCGCGGGTC TGTCCGACGG CGGCGATGGC
GACGACCTCG AAATCATCCG CCGCATCGAG CGCGGCGCGG GCAGCGCCTA TCGCGCCAAC
GGCCGCGACG TGCGCGCCAA GGACGTCGCG CTGATCTTCG CCGACGCCGC GACCGGCGCG
CACAGCCCCG CGCTCGTCAG CCAGGGCAAG ATCGCCAATG TCATCGCCGC CAAGCCGACC
GACCGCCGCG CGATGCTGGA GGAAGCGGCG GGCATCGCCG GGCTGCACGT CCGCCGCAAG
GACGCCGAAC AGAAATTGCG CGCCACCGAA ACCAACCTCA CGCGTCTCTC CGAAATCGTC
GCCGACATGG AGGTGCGCGC GGCTACGCTG CGGCGGCAGG CACGCGCGGC GGAGAAATAC
AAGAAACTCT CGGACGACAT CCGCATCGCC GAGGCGCGGC TCATCTATGC ACGCTGGCGC
GACGCGGCGG CCGCCGCCGA TCAGGCGCGC CGCGACGCCG ACGCCGCCGA GGCCGCGGTA
AAAGCTGCGC AGGACGAGCT GGAAACCATC GCCAAGGCGC AGGCCGAGGT CGCCGCCCGC
GTCGCGGCCG CACGCAGCGA TGCGCAGGCG CGGCGCGATG CGCTCGCCGA AGCGACCGCG
ACGCAGCTGC GCCTGCAGAG CGAGGAACGC GCCGCGCTGC AACGTCTCGA CGATCTCGCG
GCGCAGCAGC GGCGCATCGA GGCCGACCGC GCGCACGAAG GCGAACTCGC GCGCGAAGCC
CATGCCGCGC TGACCGCGCT CGACGCCGAA ACCAAATCGC TGGCGCAGGA CATCGCCGGG
CATGATGCAA GCAAGGCCGC GCTCGCCGAC GCCAATTTCG CCGCGCAGGC GCGCCTTCGC
GATGCCGAGG TCGCGCTCGC GCAGGCGCGC GCCAAGGCCG CGAGCGAGGC CGCCGACCGC
CGCATTGCCG CGTCGGCGCG CGATAGCGCC GAAGCCGCAG TGCGCCGCAT CGCCGCCGAC
AAGGCGCGCA TCGAGGCCGA AATCGCCGCG CTCGGCGACA GCGCCGCGCT CGCCGCCACC
CATGCCGAAA GCCTGGCGGC CGCCGAAGCT GCGGAGGCCG CCATCGCGAC CGCCGAACAG
GCGCTGTACG ACGCCGAGGC CGAGCGCGAG GCGACCGCGA CCGAACTCGC GCGCGTCGAG
GCGGCGCTCG CCGAGGCGCG CGCCGCGCTC GCCGCGCTCG ACGGAGAGGC GACGACGCTC
GAACGCGCGC TCGCCGCGGC GCAGAGCGAC GACGACCGCA TCCTCGACCG GCTCCGCGCC
CAGCCCGGTT ACGAAGCCGC GCTCGCCGCG GCGCTCGGCG ACGATCTCGA CGCCGGGACC
GACCCCGCCG CCGCGCGCAG CTGGACCGGC GCCGCCGCGG CCAGGGACGA CCCCGCACTT
CCCGCTGGAA CGACGCCGCT CGCCGCGCAT GTGCAGGCGC CCGCCGCGCT CGCGCGCCGC
CTCGCGCAGG TCGCGGTCGC CGAAACCGAC GGGGGACAGC CGCTCGCGGT CGGCCAGCGG
CTTGTCACCT TGAGCGGCGT CATGCGCCGC TGGGACGGCT TCGTCACCCG CGGCGACGGC
GCCACCGCGA CCGAGCGGCT GCAACGCCGC AACCGCCTCG ACGAACTGGC GGCGCAGCGC
CCTGCGGTCG AACTTGGCGT GCAGGAACTT CGCGACCGCC GCGAAGCCGC CGCGACCAAG
GCGGCCGCGC TGACCGAAGC CGCCGCCGCC GCGCGCAAGG CGCTCGCCGA CGCCGACGCG
GCGCGCCGCA CCGCGCTGCG CGCCGCCGAC CAGGCGCAGG CCGCGCTCGA CCGGCACCGC
GATGCCGCAG CGCTCCTCGC GCGCCGCCTT GCCGAGGTCG CCGAAACCGC GAAAGACGCC
GACGCGCAAC TCGCGGCACA GGAGGCCGCG CTCGCCGCGC TCCCCGACGA AGCGATCGGG
CGCGCCGCGC TCGCCGCCGG CGAACAGGCC GCCGACCGTG CACGCGCCAA CGCCAATAGC
GCGCGCGACG CGCTCGCCGC GCACGACCGC ACGCTCGCCG CGCTGAGCGA ACGCCAGGCG
GTCGTCAGCG CCGAGATCAA GAGCTGGAAA GCCCGCGCGG GCGAGGCCGC GCGCCGCGTC
ACCGAAATGG ACAAGCGCGC CGATGCGCTC GCCGCCGAGG CCGCGAAGCT CGCCGACGCC
CCCGCGCGCC TCGCCGAACA GCGCGCCGCC GCCGAGGCCG AGCAGGCAAG CCTGCGCGAA
AAAGTCGCCG CCGCCGAAGC GCAGGAGCGC GCCGCCGAAG CCGCGCTGCG CGAAGCCGAA
ACCGCGCTGA ACGCGATCCG CGAGCGCGTC GCCGCGGCGC GCGAAACCCG CGCCGGCGCC
GCCGCGCGCT CCGAAAATGC CGAGCTGCGC CGCGTCGAAA TGGGCCGCCT GTCGGGCGAA
CGCTTCGAAT GCCCACCGCC ACTGCTGCCG CAAAAGGCGG GGTTCGAGAG CGAGAGCATC
GGCGATCCCC AGGCCGAATC GGCGGCGCAC GACCGGCTGG TCGCCGACCG CGAGCGGCTC
GGCCCGGTCA ACCTCGTCGC CGCCGACGAA CTCGCCGAAC TCGATGCCGA GCGCGAAAAA
AACGCCGCCG AGATCGAGGA ACTGACGCAG GCGGTGCATC GCCTCCGCGG TTCGATCGGC
AATCTCAACC GCGAGGGCCG CGTCCGCCTG CTCGCGGCGT TCGAGACGGT GAACACCCAT
TTCCAGCGGC TGTTTTCGAC GCTGTTCAAC GGCGGGCAGG CGCATCTCGA ACTCGTCGAT
TCGGACGATC CGCTCGAAGC CGGGCTCGAA ATCATGGCGC AGCCGCCGGG CAAGCGCCTC
GGCACGCTCA CCCTCTTGTC GGGCGGCGAG CAGGCGCTGA CCGCAATCGC GCTGATCTTC
GGCCTCTTCC TCACCAATCC CGCGCCGATC TGCGTCCTCG ACGAGGTCGA CGCGCCGCTC
GACGACGCGA ATATCGAGCG CTTCTGCGAC CTGCTCGACC GCATGGCGCG CGAAACCAAC
ACCCGCTACC TGATCGTCAC CCACAATGCG GTGACGATGG CGCGGATGCA CCGCCTGTTC
GGCGTGACGA TGATCGAACG CGGCGTCAGC CGCCTGGTGT CGGTGGACCT CGGCGGCGCC
GAGGAACTGC TCGCGGCGGA ATAA
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| Protein sequence | MQIKRLRLTG FKSFVEPTEL RIEPGLTGVV GPNGCGKSNL LEAIRWVMGE SSPKSMRGGG
MEDVIFAGTS SRPARDFAEV ALHCDTEGAL VAGLSDGGDG DDLEIIRRIE RGAGSAYRAN
GRDVRAKDVA LIFADAATGA HSPALVSQGK IANVIAAKPT DRRAMLEEAA GIAGLHVRRK
DAEQKLRATE TNLTRLSEIV ADMEVRAATL RRQARAAEKY KKLSDDIRIA EARLIYARWR
DAAAAADQAR RDADAAEAAV KAAQDELETI AKAQAEVAAR VAAARSDAQA RRDALAEATA
TQLRLQSEER AALQRLDDLA AQQRRIEADR AHEGELAREA HAALTALDAE TKSLAQDIAG
HDASKAALAD ANFAAQARLR DAEVALAQAR AKAASEAADR RIAASARDSA EAAVRRIAAD
KARIEAEIAA LGDSAALAAT HAESLAAAEA AEAAIATAEQ ALYDAEAERE ATATELARVE
AALAEARAAL AALDGEATTL ERALAAAQSD DDRILDRLRA QPGYEAALAA ALGDDLDAGT
DPAAARSWTG AAAARDDPAL PAGTTPLAAH VQAPAALARR LAQVAVAETD GGQPLAVGQR
LVTLSGVMRR WDGFVTRGDG ATATERLQRR NRLDELAAQR PAVELGVQEL RDRREAAATK
AAALTEAAAA ARKALADADA ARRTALRAAD QAQAALDRHR DAAALLARRL AEVAETAKDA
DAQLAAQEAA LAALPDEAIG RAALAAGEQA ADRARANANS ARDALAAHDR TLAALSERQA
VVSAEIKSWK ARAGEAARRV TEMDKRADAL AAEAAKLADA PARLAEQRAA AEAEQASLRE
KVAAAEAQER AAEAALREAE TALNAIRERV AAARETRAGA AARSENAELR RVEMGRLSGE
RFECPPPLLP QKAGFESESI GDPQAESAAH DRLVADRERL GPVNLVAADE LAELDAEREK
NAAEIEELTQ AVHRLRGSIG NLNREGRVRL LAAFETVNTH FQRLFSTLFN GGQAHLELVD
SDDPLEAGLE IMAQPPGKRL GTLTLLSGGE QALTAIALIF GLFLTNPAPI CVLDEVDAPL
DDANIERFCD LLDRMARETN TRYLIVTHNA VTMARMHRLF GVTMIERGVS RLVSVDLGGA
EELLAAE
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