| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2268 |
|---|
| Symbol | |
|---|
| ID | 4080572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2386533 |
|---|
| End bp | 2387246 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010647 |
|---|
| Product | protein-disulfide isomerase |
|---|
| Protein accession | YP_617310 |
|---|
| Protein GI | 103487749 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.873653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.987426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTT TCGACGATCC GCTTCTCGAC CGCCGCACCG CGGTGCTTGC GCTTTCGGGC
GCCGCGCTGA CGCTGATGGC CGCCACGCCC GCCAGAACGA CCTGGTCGCG AACGGTGACG
ACCAGCCCGA TCGGCGCCTA TATCGTCGGC AATCCCGCGG CAAAGCTGCG GCTGGTCGAG
TATTTCAGCT ACACCTGCCA CGTCTGCGCC GATTTCGCGA AGGCGGCGTC ACTCCCGCTC
AGGACGCAAT ATATCGACCC TGGACTTGTC CGCTTCGAAT ATCGCAACCT CGTGCGCGAT
CCCGTCGACA TGACCGCGGC GCTGCTCGCG CGCGTCGGCG GCCCCAGCGC CTTCACGGAC
AATCATCAGG CGATCTTTGC CGCCTTCCCG ACCTTCATCG CCAGGGTTCA GAAAGCCACC
GACGCGCAAA AGTCCAGCTG GTTCGAGGGC AGCGTGGCGC AGCGCGCGCG CCGGATTGCG
GCCGACACCG GCCTCGCCGC GCTGATGCGC GCGCGCGGCT ATTCGGAGGC GCAGCTCACC
GCCGCCCTCG ACAGCGAAGT CGCGCAGGCC GAGCTTGTCG GCATGACCAA CATTGGCCGC
GCCGCCGACC GCGTCACCGG CACGCCCAGC TTTTTCATCA ATGGCCAGCG CGCCGATGTC
GTCGCCTGGC CCGCGCTCAA ATCGAAACTC GACGCCGCGC TCAAGGCTGC GTAG
|
|---|
| Protein sequence | MSAFDDPLLD RRTAVLALSG AALTLMAATP ARTTWSRTVT TSPIGAYIVG NPAAKLRLVE
YFSYTCHVCA DFAKAASLPL RTQYIDPGLV RFEYRNLVRD PVDMTAALLA RVGGPSAFTD
NHQAIFAAFP TFIARVQKAT DAQKSSWFEG SVAQRARRIA ADTGLAALMR ARGYSEAQLT
AALDSEVAQA ELVGMTNIGR AADRVTGTPS FFINGQRADV VAWPALKSKL DAALKAA
|
|---|
| |