Gene Sala_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2264 
Symbol 
ID4080568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2382600 
End bp2383469 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID638010643 
ProductNUDIX hydrolase 
Protein accessionYP_617306 
Protein GI103487745 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CGCTCGGCTT CACCGGCGCG CGGCTCGACC GCGCCGACCA GCTTCGCACC 
AATGAAGCCG CCTTTGCCGC GGCGCTCGCC GATCCGCGCG CGACCTGCCT CGCGCTCGAC
GGGATCGACT TTGTTCCGGG CGAGGGTGGC GGATTGCGGT GGCAGCCGCT CGACCCCGCC
GACGAGCGCG CGCCGATACT GCTGGGCATC GACGAGGCGG GCGCGCCGCG CTTCGTGCGC
GAGGCGGCGG CGGGGGTGCG CGTCGATGCG CGCTCGCGCA CGGTGATGCG GCTGCTGCCG
CTGCTCTCCA CCGAGGAAGC GGCGCTGTAT GGCGGCGCGC GCAGTCTGGT CGACTGGCAC
GCGCGGCATC GTTACTGCGC GGTGTGCGGA TCGCCGACGG TGCTGATTCG CGGCGGCTGG
GGGCGGCGCT GCGGCAACTG CAACGCCGAA CATTTCCCGC GCGTCGACCC GGTGGTGATC
ATGCTCGCCG AATATGGGGA CCGCGTACTC GTCGGGCGCC AGCCGGGCTT TCCGCCGCGC
TTTTTCTCGG CGCTCGCGGG CTTCGTCGAG CCCGGCGAAT CGCTGGAGGA AGCGGTCGCG
CGCGAATTGT TCGAGGAGGC AGGCATCCAT GTGTCCGAGG TCACCTATGT GGCGAGCCAG
CCCTGGCCCT TTCCTTCCTC GCTGATGATC GGGTGCCGCG CGGTCGCGAC TGGCGCGGCG
CTGACGCTCG ATACGACCGA GATCGAGGCG GCGATGTGGG TCGACCGCGC CGAGGTGCAC
GCCGCGCTGG CGGGCGACAT GGGCGCGCCG TTCATGGCGC CGCCGCCGCT GGCGATTGCG
CGCTATTTGC TGGAGGATTG GGTGGGGTAG
 
Protein sequence
MPLPLGFTGA RLDRADQLRT NEAAFAAALA DPRATCLALD GIDFVPGEGG GLRWQPLDPA 
DERAPILLGI DEAGAPRFVR EAAAGVRVDA RSRTVMRLLP LLSTEEAALY GGARSLVDWH
ARHRYCAVCG SPTVLIRGGW GRRCGNCNAE HFPRVDPVVI MLAEYGDRVL VGRQPGFPPR
FFSALAGFVE PGESLEEAVA RELFEEAGIH VSEVTYVASQ PWPFPSSLMI GCRAVATGAA
LTLDTTEIEA AMWVDRAEVH AALAGDMGAP FMAPPPLAIA RYLLEDWVG