Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2255 |
Symbol | |
ID | 4080558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2369834 |
End bp | 2370556 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010633 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_617297 |
Protein GI | 103487736 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TTGCAATCGT CACCGGCGGC AGCCGCGGGA TCGGGGAAGC CATTTCGCTG AAGCTTCAGG AACAGGGCGC CACGGTCGTC GCCAACTATG CCGGCAACGA CGAAAAGGCG CGCGCCTTTA CCGAACGCAC CGGGATCAAA ACCTATAAAT GGGACGTCGG CGACCATCAG GCGTGCCTCG ACGGCTGCGC ACGGGTGGCG GCCGAGGTGG GTCCGATCGA CATCGTCGTC AACAACGCCG GCATCACCCG CGACGGCACC CTCGCGCGCA TGAGCTATGA AGATTGGGAC GATGTGATGC GCGTCAATCT CGGCGGCTGC TTCAACATGG CAAAGGCCTG TTTTCCCGGC ATGGTCGAAC GCGGCTGGGG CCGCATCGTC AACATCGGCT CGATCAACGG ACAGGCGGGC CAGTACGGCC AGGTCAATTA TGCCGCCGCC AAGTCGGGCA TCCACGGTTT CACCAAGGCG CTGGCGCAGG AAGGCGCCAA AAAGGGCGTG ACGGTCAACG CGATCGCGCC CGGCTATATC GACACCGACA TGGTCGCCGC GGTGCCGCCA CAGGTGCTCG AAAAGATCGT CGCGAAGATT CCCGTCGGGC GCCTGGGCCA GGCGCACGAA ATCGCGCGCG GCGTCGCCTT CCTGTGCAGC GAGGATGCGG GCTTCATCAC CGGATCGACG ATGTCGATCA ATGGGGGTCA GCATATGTAT TGA
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Protein sequence | MARIAIVTGG SRGIGEAISL KLQEQGATVV ANYAGNDEKA RAFTERTGIK TYKWDVGDHQ ACLDGCARVA AEVGPIDIVV NNAGITRDGT LARMSYEDWD DVMRVNLGGC FNMAKACFPG MVERGWGRIV NIGSINGQAG QYGQVNYAAA KSGIHGFTKA LAQEGAKKGV TVNAIAPGYI DTDMVAAVPP QVLEKIVAKI PVGRLGQAHE IARGVAFLCS EDAGFITGST MSINGGQHMY
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