Gene Sala_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2255 
Symbol 
ID4080558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2369834 
End bp2370556 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID638010633 
Productacetoacetyl-CoA reductase 
Protein accessionYP_617297 
Protein GI103487736 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TTGCAATCGT CACCGGCGGC AGCCGCGGGA TCGGGGAAGC CATTTCGCTG 
AAGCTTCAGG AACAGGGCGC CACGGTCGTC GCCAACTATG CCGGCAACGA CGAAAAGGCG
CGCGCCTTTA CCGAACGCAC CGGGATCAAA ACCTATAAAT GGGACGTCGG CGACCATCAG
GCGTGCCTCG ACGGCTGCGC ACGGGTGGCG GCCGAGGTGG GTCCGATCGA CATCGTCGTC
AACAACGCCG GCATCACCCG CGACGGCACC CTCGCGCGCA TGAGCTATGA AGATTGGGAC
GATGTGATGC GCGTCAATCT CGGCGGCTGC TTCAACATGG CAAAGGCCTG TTTTCCCGGC
ATGGTCGAAC GCGGCTGGGG CCGCATCGTC AACATCGGCT CGATCAACGG ACAGGCGGGC
CAGTACGGCC AGGTCAATTA TGCCGCCGCC AAGTCGGGCA TCCACGGTTT CACCAAGGCG
CTGGCGCAGG AAGGCGCCAA AAAGGGCGTG ACGGTCAACG CGATCGCGCC CGGCTATATC
GACACCGACA TGGTCGCCGC GGTGCCGCCA CAGGTGCTCG AAAAGATCGT CGCGAAGATT
CCCGTCGGGC GCCTGGGCCA GGCGCACGAA ATCGCGCGCG GCGTCGCCTT CCTGTGCAGC
GAGGATGCGG GCTTCATCAC CGGATCGACG ATGTCGATCA ATGGGGGTCA GCATATGTAT
TGA
 
Protein sequence
MARIAIVTGG SRGIGEAISL KLQEQGATVV ANYAGNDEKA RAFTERTGIK TYKWDVGDHQ 
ACLDGCARVA AEVGPIDIVV NNAGITRDGT LARMSYEDWD DVMRVNLGGC FNMAKACFPG
MVERGWGRIV NIGSINGQAG QYGQVNYAAA KSGIHGFTKA LAQEGAKKGV TVNAIAPGYI
DTDMVAAVPP QVLEKIVAKI PVGRLGQAHE IARGVAFLCS EDAGFITGST MSINGGQHMY