| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2247 |
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| Symbol | |
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| ID | 4080261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2359665 |
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| End bp | 2361158 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010625 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_617289 |
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| Protein GI | 103487728 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTACG TATATGGCAT CACTTCGGCC TTGCTGGCGG GTGGCACCGC GCTGGCGCTG
GTCACCCAGT CGCCCGTCGG CGCGCAGGTC GCGCAGAACG AACAGAGCGA AATGGCACGC
GTCGTCCCGC GCGCGGGCGC GCCGGACAGC TTTGCCGACC TCGTCGAACA ATTGCAGCCT
GCGGTCGTCA ATATCTCGAC CAAGCAGGAA GTGACGCTCG GCGTACGCCT CAACCCCTTT
GCCGGCACGC GCGAGCCGAT CACGCAGGAG CAGCAGGGCG GCGGATCGGG TTTCCTCATT
TCGTCGGACG GCTATATCGT CACCAACAAC CACGTCATTT CGGGCGGACC GCGCGGCGAA
GCCGTGAACG AGGTTACTGT CACGCTGACC AACCAGCGCG AATATAAGGC GAAGATCGTC
GGTCGCGATG TGGCGTCGGA CCTTGCGCTG CTCAAGATCG ACGCCACCGG CCTGCCCTTC
GTCAAATTCG CGCAAGGCAG CCCGGCGCGC GTCGGCGACT GGGTGGTCGC GATCGGCAAC
CCGCTCGGGC TCGGCTCGAC AGTGACCGCG GGGATCATTT CGGCGGTGCA GCGCAACATC
GGGCAGGGCG GCGCCTATGA CCGCTATATC CAGACCGATA CCGCGATCAA CCGCGGCAAT
TCGGGCGGTC CGCTGTTCGA CCTGCAGGGC AATGTCGTCG GCATCAACAA TATGCTGATC
TCTCCCGTCG GCGCGAACAT CGGCGTCAAT TTCGCGATCC CCGCCGAAGC GGCGATCCCG
GTGATCGAGG CGCTGCGCGC GGGCGAGCGA CCGCAGCGCG GCTATCTGGG CATCGGCATC
GTTCCGGTGA CCGAAGACAT TGCGGCGGCG CTCGGCCTGC CCAAGGACCG CGGCGAGTTC
GTCCAGCGCG TCGAACCCGG CGAAGCGGGC GAAAAGGCCG GGCTGAAGCG CGGCGACGTG
GTGCTGAAAG TCAATGGCCG CGATGTCACG CCGCAGCAGA CTTTGTCCTA CATCGTCGCC
AACACCAAGC CCGGCACGCG CATCCCGCTC GAAATCGTGC GCGACGGGCG GACAATGACG
CTGAATGCCG TCGTTGGCAC GCGCCCGCCC GAAGAGCAGC TCGCCGGGGA CAATTTCGAC
CCCGAAGAGG AACAGACGAT GCCCGAGGAT CCATCGGGCG CGGCCGACGA GACGATCCAG
AACAGCCTGG GCATGGCGGT GCAGCCGTTG ACCCCGGCGA TCGCGCGCGC CGTCGGCATC
GACCCCGACA GCAAGGGGCT CGTCATCGCC GCGGTCGCGG GCAGCAGCGA CGCGGGCCGC
AAGGGGCTGC GCCGCGGCGA CGCGATCCTG AGCGCCAATC GCACGCCGGT CACCTCGGCG
GAGGCGCTGG CGAAGGTCAT CACCGACGCC AAAAAGGCGG GGCGCGACGC GGTGCTGCTG
GAAATCCTGC GGCGCGGCGG CCCGTCGGCC TTCATTGCGA TCCGCCTCAA ATAA
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| Protein sequence | MRYVYGITSA LLAGGTALAL VTQSPVGAQV AQNEQSEMAR VVPRAGAPDS FADLVEQLQP
AVVNISTKQE VTLGVRLNPF AGTREPITQE QQGGGSGFLI SSDGYIVTNN HVISGGPRGE
AVNEVTVTLT NQREYKAKIV GRDVASDLAL LKIDATGLPF VKFAQGSPAR VGDWVVAIGN
PLGLGSTVTA GIISAVQRNI GQGGAYDRYI QTDTAINRGN SGGPLFDLQG NVVGINNMLI
SPVGANIGVN FAIPAEAAIP VIEALRAGER PQRGYLGIGI VPVTEDIAAA LGLPKDRGEF
VQRVEPGEAG EKAGLKRGDV VLKVNGRDVT PQQTLSYIVA NTKPGTRIPL EIVRDGRTMT
LNAVVGTRPP EEQLAGDNFD PEEEQTMPED PSGAADETIQ NSLGMAVQPL TPAIARAVGI
DPDSKGLVIA AVAGSSDAGR KGLRRGDAIL SANRTPVTSA EALAKVITDA KKAGRDAVLL
EILRRGGPSA FIAIRLK
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