Gene Sala_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2246 
Symbol 
ID4080260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2358444 
End bp2359484 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID638010624 
Producthypothetical protein 
Protein accessionYP_617288 
Protein GI103487727 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTTTC CGACCGCGCC CGGCGCGATG ACGCCCGACT GGCTCGGCGC GGTGCTGGGG 
CATCCCGGCC AGCTCCGGGG CTTTACCGCG GCCAAGGTCG GCACGGGGCA GATGTGCGAC
AGCTTCCGCC TGACGCTCGA CTGGGCGGAC GATGTGCGCG GCCCGACGAG CGTAATCGCC
AAATGTCCGA GCCACGACGA AGCGAGCCGC CATATCGCGC GGCTGACCGG CACCTATGTC
AAGGAAGTCA GCTGGTATCG CGAACTCGCG GCGGACAGCG GTGTCGCGGC GCCGCAGTGC
CATCATGCCG AAATTGCGGG CGATGGTGTC GATTTCATCC TCATCCTCGC CGATCTCGCG
CCCGCCCGGC AGGGCGATCA GCTCGCGGGT ATCGACGCCG CCTGGCTCGT CCCCTGCATC
GACGCGGCGG CGGCGCTGCA CGCCCTGCTC TGGAACGACC CGCGGCTGGG CACGCTGCCC
TGGCTCGCGC GCGACAATGG CGATGTGGTG CGCGCGCTGT TCCCGCAGCT CTATGCCGGG
TTTCGCGAAC GCTATGCGGC GCGGCTCGCG TCCGAGGTGC TGGACCTCGG CGCCGGAATC
GTCCAGCGGC TCGACTGCTA TCTCGCGCGC GAACCCGCCG CGCGCACGAT CGTCCACGGC
GACCTGCGCA TCGACAATAT CCTGTTCGCG CCGGACGGCC AGGCCTGCTG GCTCGTCGAC
TGGCAGACGC TGGGGCGCGG CAGCGGCGCC GCCGACCTGG CCTATCTCGT CGGCACCAGC
ATCGCCGATC CGGCCGAGCG CGCCGCCGCC GACCGGCCGG CGTTCGACCA GTGGATCGCC
GCGCTTCGGG CGCGCGGCAT AGCGCCCGAT CCTGATGCGT TATGGACCGA TTATCGCGTC
GGCGCGCTCA GCGGCTATTT CATGGCGGTC TTCGCCTCGA TGAGCGTCGA GCGCACGCCG
CGCGGCGACG AAATGTTCGC GCTGATGGCC GAACGCCCCG CGCGCCAGGC GCTCGACCTC
GGCAGTCTCG ACCTGCTTTA G
 
Protein sequence
MSFPTAPGAM TPDWLGAVLG HPGQLRGFTA AKVGTGQMCD SFRLTLDWAD DVRGPTSVIA 
KCPSHDEASR HIARLTGTYV KEVSWYRELA ADSGVAAPQC HHAEIAGDGV DFILILADLA
PARQGDQLAG IDAAWLVPCI DAAAALHALL WNDPRLGTLP WLARDNGDVV RALFPQLYAG
FRERYAARLA SEVLDLGAGI VQRLDCYLAR EPAARTIVHG DLRIDNILFA PDGQACWLVD
WQTLGRGSGA ADLAYLVGTS IADPAERAAA DRPAFDQWIA ALRARGIAPD PDALWTDYRV
GALSGYFMAV FASMSVERTP RGDEMFALMA ERPARQALDL GSLDLL