Gene Sala_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2236 
Symbol 
ID4080250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2349669 
End bp2350379 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID638010614 
ProductHAD family hydrolase 
Protein accessionYP_617278 
Protein GI103487717 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCCGCCCCG CGTCGCCGTC TATGACCTCG ACCGCACCGT GCTGCGCACC 
CCGACCTTCA CGCTGTTCCT GCTGTGGGCG GCGTGGCGCG ACGCACCGTG GCGGCTGCTG
CTGCTCCCGG CGCTGGCGGC GCTGATGATC GGCCATGCGC TCGGCCTCTA TGGCCGCGAC
CGGTTCAAGC CCGCGGCGAT CCGGCTGATG CTCGGCGCCA GCATCGCGCC GACGCGCGCC
CGGCGGCTCG CCGTGCGGTT CGCCGCGTGG CGCGTGCCGC GCGACGTGCC GCCGGGCGCC
GCCGCCTGCA TCGCGCGCGA CCGCGCCGAA GGCTTCCGGC TGCTGATGGC GACCGCGGCG
CCCGAGTTTT ACGCGGGCGC AATCGCCGAC GCGCTCGGTT TCGATGCCAT TGTCGCCTCG
CGCCATCGCC GCGACGCGGA CGGCAACTGG CTGCCGGCGC TCGACGGCTC CAATTGCTAT
GGCGCCGAAA AGGCGCGGCG CGTCGCCGAA TGGCTCGCCG CCAACGGCGC CGGGAACGCG
CATATCCGCG CCTATTCGGA TCATGTCAGC GACGCGCCGA CCTTTGCGCT GGCGCGCGAG
GCGTGGCTCG TCGGGCGTAG CGCCAAGGTT GTGCGGCTTG CCGCCCAACA TGGCTGGCAG
GTCGCCGATT TCGAGGATGC CGCCGCAGGG GCGTCAACGG AGGTTCGTTG A
 
Protein sequence
MTDTPPRVAV YDLDRTVLRT PTFTLFLLWA AWRDAPWRLL LLPALAALMI GHALGLYGRD 
RFKPAAIRLM LGASIAPTRA RRLAVRFAAW RVPRDVPPGA AACIARDRAE GFRLLMATAA
PEFYAGAIAD ALGFDAIVAS RHRRDADGNW LPALDGSNCY GAEKARRVAE WLAANGAGNA
HIRAYSDHVS DAPTFALARE AWLVGRSAKV VRLAAQHGWQ VADFEDAAAG ASTEVR