Gene Sala_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2235 
Symbol 
ID4080249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2348065 
End bp2349672 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content70% 
IMG OID638010613 
Producthypothetical protein 
Protein accessionYP_617277 
Protein GI103487716 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.784831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGC AATTCGCGAA AGCCGCTGGC GGCGCGGCTG ACGAGCCGCT AGGGGCGGCA 
ACGATGAGCG ACGACGCCGA CCATTCTGCC GTCACCAGCC GCAGCGTCGC GCGCGGGCTC
GGCACGACGG TCCTCGCGCG CCTCGGCGCG GTGGTCGAGA TCGTCGCGCA GCCGCTCTAT
GTGCTGATGT TCGGGCTTGC GGGTTACGGC CTTTACGCCG TGCTGTGGGC GGCGGTGAAC
CTCATCGAAA ATATCTTCGA CCTCGGCATG ACCAGCGCGA TGCAGCGCAC CGTCCCGCAA
TCGGCAAGCG ATGTCGAGGC GGCGGCGGCG CTGCGCACCG CGATGATCTT CGGCGTCGGC
CCCTGCATCC TTGTCGCTGC GCTGATTACC CTGTTCGCCG CCGAGCTGGG GCCGCTTCTC
AACGTCGCGG CAAAGGACCG CCCGCTCGTC ATCCCGGCGA TCCGGATTTT CGTCTGGGCG
CTGCCGCTCT GGGCGTTCGT CGAAATCGCG ACCTCGGCGC TGCGCGCGCG GATGGTGTTC
GGCGCCGAAA TCCGGCTGCG GATCGTGTGG GAGCAATTGC TGCGCCTCGT CTTCGCGGGC
CTGTTCTTTG CGGGCGGCTT CGGCCTCAAG GGCCTGTTCA TCGCGCATCT CTGCTCGCTG
GCGATCACCG CCGCGCTGTC GGTCCGCCTG CTTGCGCGGC AATATAGCTT TGCCGATCTT
TGGCGCGGTC CGTGGGACGG TCAGACGTCG CGCGACACTT TCTGGGCGGG GCTGTCGATC
CTTCCCTCGA ATGTCATCAC GCGGCTGTTC GGCGACGCGC CCGCGCTGGT CCTCAACATG
CTGCTCCCCG GCGCGGCGGG GGCCGCGGCG GCGGGCCTCT TCACCATTGC GCGCAAGCTG
TCGAGCGTGG TGCAGCTTGT GCGCATCGCC TTCACCTATG TCATGGCGCC ACTCGCCGCG
AGCGCCGAGC GTCGCGACCG GCGACAGGTT GCCGACATCT ATGCCTATGC GACGCGGCTG
ATCGCGGCGA TCGCGCTGCC GCTCGCCGCC GTGCTCGCCG CCGGCAGCGC CTCGCTGCTC
AGCCTGTTCG GCGATCAGGC GCAGGCGGCG CAGGCGGCGC TGGTCATCCT GCTTTTCGCG
CGCGCGGTCG AGGCGGTGCT CGGCATCTCC GCGCCGGTGT TGCAGGTCGT CGCCGCCTTT
CGCCACCAGC TCACCGCCAG CATCATCGGG GTTGCCGTCG CCGTCGCCGC CGGATGGCTG
ATGGTCGGCC ATATCGATCC GCTGACCGGC GTGACGCTGG CGACGGCGAT CGGGCTGGTC
GTGATGGCCG CAATCCCGAC GCTGCAACTC GCCGTGGTCG AGCGGCTCCA TCCCTTCGAT
GCGCAATTCC CCGCGGTCGC GCTGCGCGGG ATCGGCGTCA CGATCGTCGC CGGGCTTGCC
GCGATGCTCG CCGACCTGCT CCCCGACCCG GTCGCGCTGC CCTTGCTGCT CATCATCGCC
GCGGCGGCGA TCTGGCTGGC GCTGCGCTTT GCGCTGCCGC TCGCCGATCG CGCCTCGCTC
GGCAAGACGG CGCGCCGCCT CCGCCTGATC GGACCCGCCG ACCGATGA
 
Protein sequence
MRRQFAKAAG GAADEPLGAA TMSDDADHSA VTSRSVARGL GTTVLARLGA VVEIVAQPLY 
VLMFGLAGYG LYAVLWAAVN LIENIFDLGM TSAMQRTVPQ SASDVEAAAA LRTAMIFGVG
PCILVAALIT LFAAELGPLL NVAAKDRPLV IPAIRIFVWA LPLWAFVEIA TSALRARMVF
GAEIRLRIVW EQLLRLVFAG LFFAGGFGLK GLFIAHLCSL AITAALSVRL LARQYSFADL
WRGPWDGQTS RDTFWAGLSI LPSNVITRLF GDAPALVLNM LLPGAAGAAA AGLFTIARKL
SSVVQLVRIA FTYVMAPLAA SAERRDRRQV ADIYAYATRL IAAIALPLAA VLAAGSASLL
SLFGDQAQAA QAALVILLFA RAVEAVLGIS APVLQVVAAF RHQLTASIIG VAVAVAAGWL
MVGHIDPLTG VTLATAIGLV VMAAIPTLQL AVVERLHPFD AQFPAVALRG IGVTIVAGLA
AMLADLLPDP VALPLLLIIA AAAIWLALRF ALPLADRASL GKTARRLRLI GPADR