| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2234 |
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| Symbol | sdhB |
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| ID | 4080248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2347216 |
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| End bp | 2347998 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010612 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_617276 |
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| Protein GI | 103487715 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.908086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAT TCCGCCTGCC CAAGAACAGC CGCCCGCAAA AGGGCGGCAA GGTCCACAAG
GCCGAAGGCG CGACCCACGT CAAACGGTTC AAAGTCTATC GCTACGATCC CGACAAGGGG
CAGAACCCGC ATTTCGACAC GTTCGAGATC GACACCGAGA AATGTGGCCC GATGGTGCTC
GACGCGCTCA TCAAGATGAA GAGCGAGCAG GATTCGACGC TGACCTTCCG CCGTTCGTGC
CGCGAAGGCA TCTGCGGCAG CTGTTCGATG AACATGAACG GCAAGAACGG CCTCGCCTGC
ACGACCGCGA TCGAGGATCT GAAGGGCGAC ATCACGATCA CCCCGCTGCC GGCGATGGAC
GTCATCAAGG ATCTGGTCCC CGACTTTACC CATTTCTACG CCCAATATGC GTCGATCGAG
CCGTGGCTGA AGACCAAGAC GACGACGCCG AGCGGCAAGG AGCGGCTGCA ATCGCCCGCC
GAGCGCGAAA AACTCGACGG GCTGTACGAG TGTATCCTGT GCGCCTGCTG CTCGACCAGC
TGCCCGAGCT ATTGGTGGAA CAGCGACAAG TTCCTCGGCC CCGCGATCCT GCTCCAGGCC
TATCGCTGGC TTGCCGACAG CCGCGACGAG ATGACCGGCG AGCGGCTCGA CGAACTCGAA
GACCCGTTCC GCCTCTATCG CTGCCACACG ATCATGAACT GCGCCAATGC GTGCCCGAAG
GGGCTGAGCC CCGCGCGCGC GATCGCGGAG ATCAAGAAGC TGGAGGCCGA GCGGCAGGTG
TGA
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| Protein sequence | MAEFRLPKNS RPQKGGKVHK AEGATHVKRF KVYRYDPDKG QNPHFDTFEI DTEKCGPMVL
DALIKMKSEQ DSTLTFRRSC REGICGSCSM NMNGKNGLAC TTAIEDLKGD ITITPLPAMD
VIKDLVPDFT HFYAQYASIE PWLKTKTTTP SGKERLQSPA EREKLDGLYE CILCACCSTS
CPSYWWNSDK FLGPAILLQA YRWLADSRDE MTGERLDELE DPFRLYRCHT IMNCANACPK
GLSPARAIAE IKKLEAERQV
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