Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2232 |
Symbol | |
ID | 4080303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2345592 |
End bp | 2346731 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010610 |
Product | AFG1-like ATPase |
Protein accession | YP_617274 |
Protein GI | 103487713 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.860244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAGCG TTCTTGCTGC TTACGACGCG CTCGTCGCCG CGGGCGAGCT GCGCCCCGAC CCGGAGCAGC GCGCCGCCGC GGTCAGGCTG AACCAGTTGC AGGAGGAATT GCAGGCGGTG CCGAAGCGCG GCAGCCTGCT GTGGCGCCTC GCGGGCCGCA AGCCCGAGGC GCTGCGCGGC GTCTATCTGT GGGGCGCGGT CGGGCGCGGC AAGTCGATGC TGATGGACCT CTTCTACGAC CAGCTTTCGA TCGAGCGGAA GCGGCGCGTC CATTTCCACG CCTTCATGCT CGATGTTCAT GCGCGGATGC GCGAAGTCCG CAAAAGCGAG AGCGGCGATC CCATCCCGCT CGTCGCCGAG GCGCTGGCCG AGAATGTCCG CTGCCTCGCC TTCGACGAAA TGGTCGTGAA CAACAGCGCC GACGCGATGA TCCTCTCGCG CCTGTTCACC GCGCTCATCG ACCGCGGCGT AACCATGGTC GCGACGTCGA ACCGGCCGCC GAAGGATCTC TACAAGGACG GGCTCAATCG CGAGCATTTC CTGCCCTTCA TCGCGCTGGT CGAGGAACGG CTGGAGGTGA TGGGGCTGAA CGGCCCGACC GATTACCGCC GCGACCGGCT GGGGGACGGT GCGCGCTGGT TCGTGCCCGC CGATGAGGAG GCGAGCGCCG CGCTCTCGGC CGCTTTTTTC CGCCTCACCG ACTATCCGCC CGAGGACCGC GCGCACGTCC CTTCGCTCGA CCTCGATGTC GGGGGCGGGC GGACGCTGCA TGTGCCGAAG GCGCTGAAGG GCGTGGCGGT ATTTTCGTTC AAGCGACTCT GTGCGGAGGC GCGCGGGGCG TCGGACTATC TGGCGGTCGC GCGGCACTTT CACACGGTGA TCATCGTCGG CATCCCGCGC ATGGGACCGG AGAATCGCAA CGAGGCCGCG CGCTTCGTGA CGCTGATCGA CGCGCTTTAC GAATATAAGG TCAAGCTGCT CGCGAGCGCT GCGGCGATGC CCGACCAGCT TTATGTCGCG GGCGACGGCG CGTTCGAGTT CGAGCGCACG GCGAGCCGCC TCGCGGAGAT GCAGTCGGAC GACTACCTCG CCCTAGGCCA TGGCCAGGAG GATTCCCCCG GCAATCTTCC CCCAGCGTGA
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Protein sequence | MTSVLAAYDA LVAAGELRPD PEQRAAAVRL NQLQEELQAV PKRGSLLWRL AGRKPEALRG VYLWGAVGRG KSMLMDLFYD QLSIERKRRV HFHAFMLDVH ARMREVRKSE SGDPIPLVAE ALAENVRCLA FDEMVVNNSA DAMILSRLFT ALIDRGVTMV ATSNRPPKDL YKDGLNREHF LPFIALVEER LEVMGLNGPT DYRRDRLGDG ARWFVPADEE ASAALSAAFF RLTDYPPEDR AHVPSLDLDV GGGRTLHVPK ALKGVAVFSF KRLCAEARGA SDYLAVARHF HTVIIVGIPR MGPENRNEAA RFVTLIDALY EYKVKLLASA AAMPDQLYVA GDGAFEFERT ASRLAEMQSD DYLALGHGQE DSPGNLPPA
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