| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2228 |
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| Symbol | sucA |
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| ID | 4080299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2339422 |
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| End bp | 2342244 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010606 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_617270 |
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| Protein GI | 103487709 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.424063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG AACGACAAAG CTTCGACCTC GACGAGCCGC AGGCCGGCCC GAGCTGGGCG
CCGAAGAACT GGCCGCTGAT CGACAGCGAC GATCTGACCG CCGCGCTCGA CCCGCAGCAG
ATGCAGGTTG CGGTCAAGGC CGCGGCGGCA AAGGCGGGCG CGCCGTTGTC GAATGCCGAG
GTCGAGCGCG CGGCGAATGA TTCGATCCGC GCCATGATGC TGATCCGCAC CTATCGCGTG
CGCGGGCATC TCGCCGCCAG GCTCGATCCG CTCGGGCTCA GCGAGCGCGA ACTGCCCGCC
GACCTGACTC CCGAATATCA CGGCTTCGTC GGTGCCGACC TCGACCGGCC GATCTGGCTG
GGCGGCGCGC TGGGGCTCGA AAAGGGGACG GTGCGTGAGA TCGTCGCGAT TTTGCAGGCC
AATTATTGCG GCCATGTCGG CCTGGAATAT ATGCATATTT CCGACGTCGA GGAACGGCGT
TTCCTGCAAG ACCGCATGGA GGGCGCCGAC AAGAGCGTCG AGTTCAGCCA GCGTGGCAAG
CAGGCCATTC TCAGCAAGGT GATCGAGGCC GAGGAATGGG AGAAGTTCCT CGCGCGCAAA
TATGTCGGCA CCAAGCGCTT CGGGCTCGAC GGCGGCGAGG CGATGATCCC CGCGATGGAA
GCCATCATCA AATATGGCGG CCAATATGGC GTGAAGGAAA TCGTCTATGG CATGGCACAC
CGCGGGCGGC TCAACATGCT CGCGAATGTC ATGGCGAAGC CCTATCAGGT CATCTTCCAC
GAATTTGCCG GCGGCAGCGC CAATCCCGAC GACATCGGCG GGTCGGGCGA CGTCAAATAT
CACCTCGGCA CCTCGACCGA CCGCGAGTTC GACGGGATTT CGGTGCATAT GTCGCTCGTG
CCCAACCCCT CGCACCTCGA GGCGGTCGAT CCGGTCGTGC TCGGCAAGGT GCGCGCGCAG
CAGGTTGTGC GCGACGACCT CGTCAAGCAT GAGCAGGTGC TGCCGGTGCT CATCCACGGC
GACGCCGCCT TCGCAGGGCA GGGGATCGTC TGGGAATGCC TCGGTTTTTC GGGGATTCGC
GGTTATAATA CCGGCGGCTG TATCCATTTC ATCGTCAATA ACCAGATCGG TTTCACGACA
AGTCCGCAAT TCGCCAGATC GTCCCCCTAT CCGTCCGACG TGGCAAAGGG TGTGCAGGCG
CCGATTCTGC ACGTCAACGG CGACGATCCC GAGGCGGTGA CCTTTGCGTG CAAGCTCGCG
ATCGATTTCC GCCAGCAGTT CAAGCGCGAC GTCGTGATCG ACATGTGGTG CTATCGCCGC
TTCGGCCATA ATGAGGGCGA CGAACCCTCG TTCACCCAGC CGCTGATGTA CGAACGCATC
CGCAAGCACC CGCCGGTGTC GCAGCTGTGC GCCGCGAAGC TGGAGGCCGA AGGCGTGATC
GAGCCGGGCT GGGCCGACGC GCGCCGCGCC GAACTGGTCG CGCGGCTGGA AAGCGATTTC
GAGGCGGCCA AAAGCTACAA GCCGAACAAG GCCGACTGGT TCGCCGGGCG CTGGTCGGGG
CTCTATGCGC CGACCGACCC CGAAAATGCG CGCCGCAACA TCGCGACGGG CGTGACCGAA
AAGCTGTTCG ATTCGATCGG CCGCACGCTG ACCACGATCC CCGCCGATGT CGAGGTTCAC
AAGACGCTGC GCCGCGTCAT CGACGCGCGC GCCGCGATGT TCGCTGACAA GGATGATGGC
GAGGTGTTCG ACTGGGCGAC CGCCGAAAGC CTTGCTTTCG GCACCCTGCT CAGCGAGGGC
TATCAGGTGC GCCTGTCGGG CCAGGATTCG GGCCGCGGCA CCTTCAGCCA GCGTCACGCG
GTCTGGGTCG ACCAGAAGAC CGAGGAAAAA TATATCCCGC TGACCAGCGT GCCGCACGGT
CGGTTCGAGG TGCTCGACAG TCCCTTGAGC GAATATGGCG TGCTCGGTTT CGAATATGGC
TATGCGATGG CCGACCCGAA ATCGCTTGTG TTGTGGGAAG CGCAGTTCGG TGACTTTGCC
AACGGCGCGC AGATCATGAT CGACCAGTTC ATCGCGGCGG GCGAAGCCAA GTGGCTGCGC
GCCAACGGGC TCGTGATGCT GCTCCCCCAC GGCTATGAAG GGCAGGGCCC CGAACATAGC
TCGGCGCGCC TCGAACGCTT CCTGCAATTA TGCGCGGGTG ACAATATCCA GGTGTGCAAT
ATCTCGACGC CGTCGAACTA TTTTCATGTC CTGCGTCGCC AGATGCTGCG CTCGTTCCGC
AAGCCGCTCA TCATCATGAC GCCCAAGTCG CTGCTGCGGC ACAAGCTTGC GGTGTCGCGG
CGCAGCGACT TCATCGGCGA CGCGCATTTC CGCCGCATCA TGTCCGACCG CACGCCGCCC
GCCGATGCCG ACATCAAGCG TGTCGTGCTC TGTTCGGGCA AGGTCGGGTA CGACCTGATG
GAGGCGCGCG ATGCCGCCGA CCTCACCGAT ACGACGGTGA TCCGCATCGA GCAGCTCTAT
CCCTTTCCCG GCGAGGCGCT CGCGGTGCGG CTGAGGCGGA TGCCGAAGCT GGAGGATGTC
GTGTGGGCGC AGGAAGAGCC GCGCAACAAC GGCGCCTGGT TCTTCGTGGG CGAACTGATC
GAGGAAGCGC TGGCCGAAGC GGGCAAGAAG GGCATGCGCC CGCGCTATGC CGGCCGCGCC
TCCGCAGCAT CGCCCGCGAC CGGCCTGATG AGCCGCCACC AGACCGAACA GTCGGCGCTG
GTCGCCGATG CGCTCGGCCT GTCGGTTCGC GCCGAAATCC GCCGCACCAA GAACAAAGCC
TGA
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| Protein sequence | MNLERQSFDL DEPQAGPSWA PKNWPLIDSD DLTAALDPQQ MQVAVKAAAA KAGAPLSNAE
VERAANDSIR AMMLIRTYRV RGHLAARLDP LGLSERELPA DLTPEYHGFV GADLDRPIWL
GGALGLEKGT VREIVAILQA NYCGHVGLEY MHISDVEERR FLQDRMEGAD KSVEFSQRGK
QAILSKVIEA EEWEKFLARK YVGTKRFGLD GGEAMIPAME AIIKYGGQYG VKEIVYGMAH
RGRLNMLANV MAKPYQVIFH EFAGGSANPD DIGGSGDVKY HLGTSTDREF DGISVHMSLV
PNPSHLEAVD PVVLGKVRAQ QVVRDDLVKH EQVLPVLIHG DAAFAGQGIV WECLGFSGIR
GYNTGGCIHF IVNNQIGFTT SPQFARSSPY PSDVAKGVQA PILHVNGDDP EAVTFACKLA
IDFRQQFKRD VVIDMWCYRR FGHNEGDEPS FTQPLMYERI RKHPPVSQLC AAKLEAEGVI
EPGWADARRA ELVARLESDF EAAKSYKPNK ADWFAGRWSG LYAPTDPENA RRNIATGVTE
KLFDSIGRTL TTIPADVEVH KTLRRVIDAR AAMFADKDDG EVFDWATAES LAFGTLLSEG
YQVRLSGQDS GRGTFSQRHA VWVDQKTEEK YIPLTSVPHG RFEVLDSPLS EYGVLGFEYG
YAMADPKSLV LWEAQFGDFA NGAQIMIDQF IAAGEAKWLR ANGLVMLLPH GYEGQGPEHS
SARLERFLQL CAGDNIQVCN ISTPSNYFHV LRRQMLRSFR KPLIIMTPKS LLRHKLAVSR
RSDFIGDAHF RRIMSDRTPP ADADIKRVVL CSGKVGYDLM EARDAADLTD TTVIRIEQLY
PFPGEALAVR LRRMPKLEDV VWAQEEPRNN GAWFFVGELI EEALAEAGKK GMRPRYAGRA
SAASPATGLM SRHQTEQSAL VADALGLSVR AEIRRTKNKA
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