| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2227 |
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| Symbol | |
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| ID | 4080298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2338186 |
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| End bp | 2339400 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010605 |
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| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_617269 |
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| Protein GI | 103487708 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.373551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG AAGTCAAAGT CCCCACGCTG GGCGAAAGCG TCACCGAAGC GACGATCGGC
GAATGGCTGA AAAAGCCCGG CGAAGCGGTC GCGCTCGACG AGCCCATCGC CAGCCTTGAA
ACCGACAAGG TCGCGGTCGA GGTGCCCTCG CCCGTCGCGG GGGTGATGGG GCAGCAGCTC
GCTGCGGTCG GCGACACGGT CAATGTCGGT GCGGTGATCG CGACGGTTGA AGCGGGCGAT
GCGGCGGCGG CGCCCGCCCC CGCGAAGGCC GAGACGACGG CGCCCGCCCC CGCCGCGACC
GCCCCCGCCG CGGGTGCAGG CATCGACACC GTTGCAACCA TGTCGCCGGC GGTGCGCCGT
CTCGTCCTCG AACACGGGCT CGATCCGACG AAGATCAAGG GGACGGGGAA GGACGGTCGG
CTGACCAAGG AAGATGTGCT CGCGGCGGCG AATGCGGCGC CCGAAACCCC GCCTGCTTCG
GCTCCCGCGC CGGCGGCAGC GCCCGCCGAG CCGGGCCGTC AGGAAGAGCG CGTCAAGATG
ACCCGCCTGC GCCAGACGAT CGCCAAGCGG CTGAAAGCGG CGCAGGACAC GGCGGCGATG
CTGACGACCT TCAACGACGT CGACATGTCG GCGGTGATCG AAGCGCGCGC GCGCTACAAG
GATCTGTTCG AAAAGAAGCA TGGCGTGCGG CTGGGCTTCA TGGGCTTCTT CACCAAGGCG
GCGTGCCTCG CGCTCAAGGA CATTCCCGCG GTCAACGGCC GCATCGACGG CGACGAGATC
GTCTATAATG GTTATATGGA CATTTCGGTC GCGGTGAGCG GGCCGAGCGG GCTTGTCGTG
CCGGTGATCC GCAATGCCGA GACGCTGAGC TTCGCCGACA TCGAAAAGAC GATCGGTGAT
TTCGGCAAGC GCGCCAAGGA GGGCACGCTG ACCATGGACG ACATGGCGGG CGGCACCTTT
ACCATTTCGA ACGGCGGCGT GTTCGGGTCG CTGATGTCGA CCCCGATCAT CAACCCGCCG
CAGTCGGCGG TGCTCGGCCT CCACCGCATC GAGGACCGTC CGGTCGCGAT CAATGGTCAG
GTCGTGATCC GTCCGATGAT GTATCTGGCG CTCAGCTATG ACCACCGCCT GATCGACGGC
CGCGAGGCGG TGACCTTCCT CAAGACGATC AAGGAAGCGA TCGAAGATCC GACGCGGTTG
CTGATCGATT TGTAA
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| Protein sequence | MSTEVKVPTL GESVTEATIG EWLKKPGEAV ALDEPIASLE TDKVAVEVPS PVAGVMGQQL
AAVGDTVNVG AVIATVEAGD AAAAPAPAKA ETTAPAPAAT APAAGAGIDT VATMSPAVRR
LVLEHGLDPT KIKGTGKDGR LTKEDVLAAA NAAPETPPAS APAPAAAPAE PGRQEERVKM
TRLRQTIAKR LKAAQDTAAM LTTFNDVDMS AVIEARARYK DLFEKKHGVR LGFMGFFTKA
ACLALKDIPA VNGRIDGDEI VYNGYMDISV AVSGPSGLVV PVIRNAETLS FADIEKTIGD
FGKRAKEGTL TMDDMAGGTF TISNGGVFGS LMSTPIINPP QSAVLGLHRI EDRPVAINGQ
VVIRPMMYLA LSYDHRLIDG REAVTFLKTI KEAIEDPTRL LIDL
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