Gene Sala_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2217 
Symbol 
ID4080288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2328228 
End bp2328794 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content69% 
IMG OID638010595 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_617259 
Protein GI103487698 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0249063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCGC GCGCCCGCTT GGGCACATCG CGGCGCATGT CGACCATCGC CCCCGTGATC 
GAAACCGCCC GCCTGCGCCT GCGCCCCGGT CGCCTTGCCG ACAAGGATAC GCATATCGCG
ATGTGGGCCG ACGCCCGCGT CACGCGCTTT ATCGGCGGCG AACCGCGCGC GCCCGATGTC
AGCTGGGGCA AGTTTTTAAG CTCGGCGGGG CTGTGGCCGG TGATGGGTTT CGGTTACTGG
GTATTCGCCG ACCGCGCGAG CGACGCGCTG ATCGGCATGG GCGGGCTCAG CTATTTCTGC
CGCGGCATAG CCGAACTCGA AGGCGTGCCC GAAGCGGGCT GGGCGTTCGA TGCCGACCAT
TGGGGCGCGG GCTATGCGAC CGAGGCGATG ACCGCCGTGC TCGGCTGGGC CGACGCGAAC
CTCGACGCAA AGCATGTGCG CTGCATCATC GACCGCGGCC ATGCAGCGTC CGAGCGGGTT
GCGGCGAAGC TGGGGTTCCG GCACATCGGC GACACCGACG CGCTGGGGCA TGTGACGGCG
ATTTATTCGC GGCCGCGGGG CGGCTGA
 
Protein sequence
MTARARLGTS RRMSTIAPVI ETARLRLRPG RLADKDTHIA MWADARVTRF IGGEPRAPDV 
SWGKFLSSAG LWPVMGFGYW VFADRASDAL IGMGGLSYFC RGIAELEGVP EAGWAFDADH
WGAGYATEAM TAVLGWADAN LDAKHVRCII DRGHAASERV AAKLGFRHIG DTDALGHVTA
IYSRPRGG