Gene Sala_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2213 
Symbol 
ID4080171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2324212 
End bp2325732 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content69% 
IMG OID638010591 
Productpeptidase M28 
Protein accessionYP_617255 
Protein GI103487694 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.201523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0575803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGCC GCGCGCCCAT GAAAGCCTCC TTCTTTCGCG CCGCCGTTGC GGCCGTCGCC 
CTCGTCGCCA CGTCCGCTCC CGCGCAGGCC GCATCCGCGA CCGCCGATGC GCCGGTCACC
GAAGCCGACC TCGCCGCGCA CATGAAAATC CTGGCCGGGG ATGCGTTCGA GGGGCGCGCG
CCGGGCACCG ATGGCGAGGA TCGCACGATC GCCTATATCG TCGGCGAATG GGCGAAGGCG
GGGCTCGAAG CCGTGCCGGG CAGCGCGACG CCGTGGCTCC AGCCGGTGCC CTTCATCGAA
ACGCAGGCGC TCGGCGGGAC AGCGACCTTC AACGTGAACG GCCGCAATTT TCCGCTAGAC
GATGACAGCA TCGTGCTCAC CGGGCGCGAT GCGTCGGTGT CGCTGGCGGG CGTCCCCGCG
GTCTTCGTCG GCTATGGCAT CGACAGCACC GGACAGGTGA ATGCCGACGT CCGCGGCAAA
CTCGCGATCA TGCTGTTCGA CAATGCGCCT TTTGGCGACA GATTGCCGCG CTATCGCGAG
CGGCGCCAGA TGCTCGCCGA TGCGGGGGCG AGCGCGGTGT TGGTGATCGC GACCGACGCG
GTGCCGTGGG ACGCACTGCG CGAGAGTGTC GGCAGCAAAT CCATGCGCCT TGCCAGCGTC
AAGGCGGGTG CGCCGGTGAG CGGTTTCCTG TCAGGCAACG CGGCCGACGC ACTGTTCAAG
GCCGCTGGGC AGGATGGCGC CGCGCTGCGC GAAGCGGCCG CGTCGGCCGA CTATCGGGGT
ATGGCGCTGC CGGTGGCTGC CGACTTCACC GCAGAGTCGA CGGTCCGCGC CTTTGCGAGC
CACAATATCA TCGCCAAACT GCCCGGCGCG AAGCCCGACG GCAAGGCGGT GCTGTTTCTG
GGACATTGGG ACCATCTGGG CCTTTGCGCG CCCGAGGGCG AGGCCGACCG CATCTGTAAC
GGCGCGGTCG ACAATGCGAG CGGGATCGCG GTACTGATCG AGGTCGCGAA GCGGCTGGGC
AAGGGGCCGC GCCCCGATCG CGACATCTAT TTCCTCGCGA CGACGGCGGA GGAAAAGGGC
CTGCTCGGCG CGCGCTGGTT CGCCGACCAT CCGGTGGTGC CGCTTGGCGA CATCACCGTG
GCACTCAACG TCGACACGAT CGCAATCTCG CCGCGCGGCA CGCCGGTCGC GACGATCGGG
CGCGGCAAGC CCGCCTATGA CGCGCTGGTG CGCGAGGTGG CGACCAGGCT CGGCCGCACG
CTCGACGAGG ATGGCGAGGC CGACGCCTTC ATCCAGCGAC AGGACGGCTG GGCGCTGGGT
GCGAAGGGCG TCACCTCGCT GATGGTCGGC GGCAGCTTTT CGGACATGAA GCTGCTCGAA
GCCTTTTTGT CGGGCGATTA TCACCGCGCG GCCGACAATT TCTCCGACAA GATCCCGCTC
GGAGGGGCGG CCGAGGATGC CGATTTGCAC GTCGCGCTCG GCCGGGCGTT CGCCGATACG
AAACGGTGGC CGGGCAAGTA A
 
Protein sequence
MSCRAPMKAS FFRAAVAAVA LVATSAPAQA ASATADAPVT EADLAAHMKI LAGDAFEGRA 
PGTDGEDRTI AYIVGEWAKA GLEAVPGSAT PWLQPVPFIE TQALGGTATF NVNGRNFPLD
DDSIVLTGRD ASVSLAGVPA VFVGYGIDST GQVNADVRGK LAIMLFDNAP FGDRLPRYRE
RRQMLADAGA SAVLVIATDA VPWDALRESV GSKSMRLASV KAGAPVSGFL SGNAADALFK
AAGQDGAALR EAAASADYRG MALPVAADFT AESTVRAFAS HNIIAKLPGA KPDGKAVLFL
GHWDHLGLCA PEGEADRICN GAVDNASGIA VLIEVAKRLG KGPRPDRDIY FLATTAEEKG
LLGARWFADH PVVPLGDITV ALNVDTIAIS PRGTPVATIG RGKPAYDALV REVATRLGRT
LDEDGEADAF IQRQDGWALG AKGVTSLMVG GSFSDMKLLE AFLSGDYHRA ADNFSDKIPL
GGAAEDADLH VALGRAFADT KRWPGK