Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2213 |
Symbol | |
ID | 4080171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2324212 |
End bp | 2325732 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010591 |
Product | peptidase M28 |
Protein accession | YP_617255 |
Protein GI | 103487694 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.201523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0575803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATGCC GCGCGCCCAT GAAAGCCTCC TTCTTTCGCG CCGCCGTTGC GGCCGTCGCC CTCGTCGCCA CGTCCGCTCC CGCGCAGGCC GCATCCGCGA CCGCCGATGC GCCGGTCACC GAAGCCGACC TCGCCGCGCA CATGAAAATC CTGGCCGGGG ATGCGTTCGA GGGGCGCGCG CCGGGCACCG ATGGCGAGGA TCGCACGATC GCCTATATCG TCGGCGAATG GGCGAAGGCG GGGCTCGAAG CCGTGCCGGG CAGCGCGACG CCGTGGCTCC AGCCGGTGCC CTTCATCGAA ACGCAGGCGC TCGGCGGGAC AGCGACCTTC AACGTGAACG GCCGCAATTT TCCGCTAGAC GATGACAGCA TCGTGCTCAC CGGGCGCGAT GCGTCGGTGT CGCTGGCGGG CGTCCCCGCG GTCTTCGTCG GCTATGGCAT CGACAGCACC GGACAGGTGA ATGCCGACGT CCGCGGCAAA CTCGCGATCA TGCTGTTCGA CAATGCGCCT TTTGGCGACA GATTGCCGCG CTATCGCGAG CGGCGCCAGA TGCTCGCCGA TGCGGGGGCG AGCGCGGTGT TGGTGATCGC GACCGACGCG GTGCCGTGGG ACGCACTGCG CGAGAGTGTC GGCAGCAAAT CCATGCGCCT TGCCAGCGTC AAGGCGGGTG CGCCGGTGAG CGGTTTCCTG TCAGGCAACG CGGCCGACGC ACTGTTCAAG GCCGCTGGGC AGGATGGCGC CGCGCTGCGC GAAGCGGCCG CGTCGGCCGA CTATCGGGGT ATGGCGCTGC CGGTGGCTGC CGACTTCACC GCAGAGTCGA CGGTCCGCGC CTTTGCGAGC CACAATATCA TCGCCAAACT GCCCGGCGCG AAGCCCGACG GCAAGGCGGT GCTGTTTCTG GGACATTGGG ACCATCTGGG CCTTTGCGCG CCCGAGGGCG AGGCCGACCG CATCTGTAAC GGCGCGGTCG ACAATGCGAG CGGGATCGCG GTACTGATCG AGGTCGCGAA GCGGCTGGGC AAGGGGCCGC GCCCCGATCG CGACATCTAT TTCCTCGCGA CGACGGCGGA GGAAAAGGGC CTGCTCGGCG CGCGCTGGTT CGCCGACCAT CCGGTGGTGC CGCTTGGCGA CATCACCGTG GCACTCAACG TCGACACGAT CGCAATCTCG CCGCGCGGCA CGCCGGTCGC GACGATCGGG CGCGGCAAGC CCGCCTATGA CGCGCTGGTG CGCGAGGTGG CGACCAGGCT CGGCCGCACG CTCGACGAGG ATGGCGAGGC CGACGCCTTC ATCCAGCGAC AGGACGGCTG GGCGCTGGGT GCGAAGGGCG TCACCTCGCT GATGGTCGGC GGCAGCTTTT CGGACATGAA GCTGCTCGAA GCCTTTTTGT CGGGCGATTA TCACCGCGCG GCCGACAATT TCTCCGACAA GATCCCGCTC GGAGGGGCGG CCGAGGATGC CGATTTGCAC GTCGCGCTCG GCCGGGCGTT CGCCGATACG AAACGGTGGC CGGGCAAGTA A
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Protein sequence | MSCRAPMKAS FFRAAVAAVA LVATSAPAQA ASATADAPVT EADLAAHMKI LAGDAFEGRA PGTDGEDRTI AYIVGEWAKA GLEAVPGSAT PWLQPVPFIE TQALGGTATF NVNGRNFPLD DDSIVLTGRD ASVSLAGVPA VFVGYGIDST GQVNADVRGK LAIMLFDNAP FGDRLPRYRE RRQMLADAGA SAVLVIATDA VPWDALRESV GSKSMRLASV KAGAPVSGFL SGNAADALFK AAGQDGAALR EAAASADYRG MALPVAADFT AESTVRAFAS HNIIAKLPGA KPDGKAVLFL GHWDHLGLCA PEGEADRICN GAVDNASGIA VLIEVAKRLG KGPRPDRDIY FLATTAEEKG LLGARWFADH PVVPLGDITV ALNVDTIAIS PRGTPVATIG RGKPAYDALV REVATRLGRT LDEDGEADAF IQRQDGWALG AKGVTSLMVG GSFSDMKLLE AFLSGDYHRA ADNFSDKIPL GGAAEDADLH VALGRAFADT KRWPGK
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