Gene Sala_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2204 
Symbol 
ID4080162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2316236 
End bp2317570 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content67% 
IMG OID638010582 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_617246 
Protein GI103487685 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.329049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACTG CGCGTTTCGG ACTTTATGCG GCGCTGCTGG CGCTGCCGCT GGCGGGTTGC 
GGCGTGTTCA AGGGCGACGG CGGCCCCAGG ACGCCGACGA TCGGCAATCG CGTGTCGATC
CTGTCGAACG ACAACAGCAT CAAGGTCGAT CCCGCGACTG CGGCGATCGC GGTGGTGCTG
CCCGATCCGG TCGTGAATGC GGCCTGGGCG CAATCGGGCG GCAATGCGTC GAAATCGATG
GGGCATCCGG CGCTCGGCGC GGCGCGGACC AAACTCTGGG AAGCGAAAAT CGCGGGCAAC
ACGAACAAGC AGCGCCTCGC CTCGTCGCCG GTGGTCGCGG ACAACCGCCT GTTCGTCGTC
GATACCGAAG CCGTCGTTTC GGCCTTTGCC GCCGACACGG GCGCGAAGCT GTGGAGCGCG
GCGATCGGCA GCACGGGCAA GGATTTCAGG GATTCGCTGT TCGGCGGCGG GGCGAGCGTC
GATGGCAATG TCGTCTATGC GACGAGCGGC GTCGGCGATG TCGCGGCGCT CAATGCGGCC
GACGGATCGG TGCTGTGGAA GGTGAAGCCC GCGGGCCCGC TGCGCGGCGC GCCGACGGTG
GCTTTTGGCG GCGTCTATGT GATCAGCCAG GACAACCAGA TTTTCGCGCT CAATGCCGCC
GACGGCGCGG TCCAGTGGCA GGCGACGGCG TCGCTGGAAC CGGGCAGTGT GTTCGGCGCG
GCGTCGCCCG CGGCCGGGCA GGGCACGATC GTCGCGGGTT TCTCGTCGGG CGAGGTGCAG
GCCTATCGCT ATGAAAACGG CCGCGACCTG TGGGAAGACG CGCTCGCGCG CACGTCAATG
GCGCTGTCGG TGTCGACGCT TACCGACGTC GATGCCGATC CGGTGATCGA CCGCGGCCGC
GTCTTCGCGC TCGGCCAGGG TGGCCGCATG GCGAGTTACG AGCTGGTCAC CGGCCAGCGC
AGCTGGGAAA TCTCGATCGC CGGCATCTCG ACCCCCTATG TCGTCGGCGA ATGGGTCTAT
GCGATGACCG ACGACGGCAA GCTGTTGTGC GTCGCGCGGG CGAGCGGCAA GGTGCGCTGG
ATCCAGCAGC TTGCGCGTTT CCGCGTCGAA ACCGAGAAGA AAAAGAAGGA TCCGATCCGC
TGGACCGGGC CGATTCTGGC GGGGGGACGG CTGATCGCGG TGAACAGCGA AGGCACGCTG
GCGGAGTTTT CGCCGACCGA CGGCGCGCTG CTCGCATCGA CCGAGTTCGA GTCGTCGCTG
TCGCAATCGC CGATCGTCGC GAACAACATC CTCTACATCC TCGCGGACGA CGGGACGATC
ACCGCCTGGC GCTAG
 
Protein sequence
MRTARFGLYA ALLALPLAGC GVFKGDGGPR TPTIGNRVSI LSNDNSIKVD PATAAIAVVL 
PDPVVNAAWA QSGGNASKSM GHPALGAART KLWEAKIAGN TNKQRLASSP VVADNRLFVV
DTEAVVSAFA ADTGAKLWSA AIGSTGKDFR DSLFGGGASV DGNVVYATSG VGDVAALNAA
DGSVLWKVKP AGPLRGAPTV AFGGVYVISQ DNQIFALNAA DGAVQWQATA SLEPGSVFGA
ASPAAGQGTI VAGFSSGEVQ AYRYENGRDL WEDALARTSM ALSVSTLTDV DADPVIDRGR
VFALGQGGRM ASYELVTGQR SWEISIAGIS TPYVVGEWVY AMTDDGKLLC VARASGKVRW
IQQLARFRVE TEKKKKDPIR WTGPILAGGR LIAVNSEGTL AEFSPTDGAL LASTEFESSL
SQSPIVANNI LYILADDGTI TAWR