| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2197 |
|---|
| Symbol | |
|---|
| ID | 4080155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2308085 |
|---|
| End bp | 2310328 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638010575 |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_617239 |
|---|
| Protein GI | 103487678 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.541923 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC CAGCGCCCGC CATCACCCCC GAAATCGTCG CCGAGCACGG CCTTGCTCCG
CAAGAATATG AGCGCGTCCT CGCCGCGCTC GGGCGCGAGC CGAACCTGGT CGAACTGGGT
ATCTTCTCGG TCATGTGGTC GGAGCATTGC AGCTATAAAA GCTCGCGCAT CCATCTGAAG
AAGCTGCCGA CCGAGGCGCC GTGGGTGATC TGCGGCCCCG GCGAGAATGC CGGGGTGATC
GACATCGGCG AAGGACCGGA CGGCAAGAAG CTCGCCGCGA TCTTCAAGAT GGAGAGTCAC
AACCACCCAA GCTACATCGA ACCCTATCAG GGGGCGGCCA CGGGAGTCGG CGGGATCCTG
CGCGACGTCT TCACCATGGG CGCGCGCCCG GTCGCGAACC TCAACGCGCT GCGCTTCGGG
CGGCCCGACC ATCCGAAGAT GCGGCACCTG ATCGCGGGGG TCGTCCACGG CATCGGCGGC
TATGGCAATT GCGTCGGCGT GCCGACCGTC GGCGGCGAGG TCAATTTCCA TGCCGCCTAT
GACGGCAATA TCCTCGTCAA CGCGATGACC GTCGGCGTCG CCGAACAGGA CAGGATCTTC
TATTCGGCCG CATCGGGCGT CGGCAATCCG ATCGTCTATG TCGGCTCGAA AACCGGCCGC
GACGGCATCC ACGGCGCGAC GATGGCGAGT GCCGATTTCG GCGAGGATGC GGAGGAAAAG
CGCCCGACGG TGCAGGTCGG CGACCCCTTT ACCGAAAAGC TGCTGATCGA GGCGTGCCTC
GAACTGATGG CGTCGGACGC GATCGTCGCG ATCCAGGACA TGGGCGCCGC GGGCCTGACC
AGTTCGTCGG TCGAAATGGC GTCGAAGGGC GGCGTCGGCA TCCACCTCAG GATGGACGAT
GTGCCGCAGC GTGAAACCGG CATGACGGCC TATGAAATGA TGCTGTCGGA AAGCCAGGAA
CGCATGTTGA TGGTGCTGAA GCCCGGCAAG GAAGAGTTTG CGAAGGCGAT CTTCCACAAA
TGGGAACTCG ACTTCGCGGT CATCGGCACC GTCACCGACA CCGGCCGCAT GGTGCTCGAA
CATCATGGGC AAATCGTCTG CGACATTCCG CTCGCCCCGC TCGCCGACGA TGCGCCCCTT
TACGACCGTC CGCATGTGCC CACGCCGAAG CAGCCCGAAC TGTCCGACGT CCCGGAGACC
AAGGATGTCG CGGCCGACCT CAAGGCCTTG ATGGGCACCC CCGATATCGC CAGCCGCCGC
TGGATCTGGG AGCAATATGA CAGCCAGGTC GGCGCCGACA CGGTGCAGAC CGGCGGCGAC
GCCGCGCTGG TCCGCATCCA CGGCACCAAC CGCGCGCTCG CGATGAGCAC CGACTGCACC
CCGCGCTATT GCTACGCCGA TCCGGTCGAG GGCGGCAAGC AGGCGGTCGC CGAAACGTGG
CGCAACATCA GCGCGGTCGG CGCGACGCCG CTCGCGATCA CCAACTGCCT CAATTTCGCC
AACCCGCAGC GCCCCGAAAT CATGGGCCAG ATCGTCGGCT GCCTCGACGG CATGGCACAG
GCGTGCCGCG CGCTCGACTA TCCGATCGTG TCGGGCAACG TCAGCCTCTA CAACGAGTCC
AAGGCGACGG GTGGCGGCAG CGCGATCCTG CCGACCCCCG CGATCGGCGG CGTCGGCGTG
ATCGAGGATC TGGGCAAAGC GGTCGGCATC GGCTTCAAGC GCACCGGCGA CATCGTCCTC
GCGGTCGGCG AACGCATGGG CCACCTCGGC CAGTCGATCT GGCTGCGCGA AATCCACGGC
CGCGAAGAAG GCCCGCCGCC GCCCGTCGAC CTCAAGGCCG AGAAGCGCAC CGGCGATTTC
ATCCGCCAAA GCATCAACGC CGGCTGGATC ACCGCGTGCC ACGACGTCTC CGACGGCGGC
GTCGCCGTGG CGCTCGCCGA AATGGCCTTG AAGTCGAACA TCGGCGTGCT GGTGAGCGAG
GAACAGCCGT TCGGGGTGGC GGAGAGCTTC TTCGGCGAGG ATCAGGGGCT GTATCTCGTC
ACCGTCTGCG ACACCTGCCT TGCCGACTTC CTCGACGCCG CGAATCGCGC CGACGTGCCC
GTCGATCCGC TCGGGCGCAC GATCAAGGAT CGCATCGTGT TCGAGCTGCC CGACAGCGAT
CATCAGGTGA CGCTCGCCGA ACTGCGCGAA GCGCATGAAG GCTTCTTCCC CAAGCTGATG
GGCGCCGACG CGGCGCTGGC GTAA
|
|---|
| Protein sequence | MTQPAPAITP EIVAEHGLAP QEYERVLAAL GREPNLVELG IFSVMWSEHC SYKSSRIHLK
KLPTEAPWVI CGPGENAGVI DIGEGPDGKK LAAIFKMESH NHPSYIEPYQ GAATGVGGIL
RDVFTMGARP VANLNALRFG RPDHPKMRHL IAGVVHGIGG YGNCVGVPTV GGEVNFHAAY
DGNILVNAMT VGVAEQDRIF YSAASGVGNP IVYVGSKTGR DGIHGATMAS ADFGEDAEEK
RPTVQVGDPF TEKLLIEACL ELMASDAIVA IQDMGAAGLT SSSVEMASKG GVGIHLRMDD
VPQRETGMTA YEMMLSESQE RMLMVLKPGK EEFAKAIFHK WELDFAVIGT VTDTGRMVLE
HHGQIVCDIP LAPLADDAPL YDRPHVPTPK QPELSDVPET KDVAADLKAL MGTPDIASRR
WIWEQYDSQV GADTVQTGGD AALVRIHGTN RALAMSTDCT PRYCYADPVE GGKQAVAETW
RNISAVGATP LAITNCLNFA NPQRPEIMGQ IVGCLDGMAQ ACRALDYPIV SGNVSLYNES
KATGGGSAIL PTPAIGGVGV IEDLGKAVGI GFKRTGDIVL AVGERMGHLG QSIWLREIHG
REEGPPPPVD LKAEKRTGDF IRQSINAGWI TACHDVSDGG VAVALAEMAL KSNIGVLVSE
EQPFGVAESF FGEDQGLYLV TVCDTCLADF LDAANRADVP VDPLGRTIKD RIVFELPDSD
HQVTLAELRE AHEGFFPKLM GADAALA
|
|---|
| |