| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2178 |
|---|
| Symbol | |
|---|
| ID | 4080212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2288319 |
|---|
| End bp | 2289425 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010556 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_617220 |
|---|
| Protein GI | 103487659 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA TCAATCCTCC CGCCGATCGG GTCGCGACCC CCTTCGCGCC GTCGGCACCC
AGGACGCCCA AATCGGCCAT CGCGGACGAT ATGGCGATGA TCCGCGCGGC ATCGGAGCTG
ACGCGCGATC TCGTGCAGCC GAGCGCGCGG ATTTACTGGG CCGATTTCCT TGCCTCGACC
GTCATCGGCT ATGCCGGCAT CGCGGCGGCG ATCCTCGCGC CCTCGATCGT CTGGATGCTC
CTTGCGGCCA CCATCGCGGT CGTCGCGCTC TATCGCGCGG GCAGTTTCAT CCACGAACTC
ACGCACATCC GCAAGAATGC GCTGCCGGGG TTCCGCTTCG CGTGGAACCT GCTCGTCGGC
GTGCCGCTGC TGATCCCGTC CTTCATGTAT GAAGGCATCC ACAGCCTGCA CCACAACCGC
ACCAGATATG GCACGGTCGA GGATCCCGAA TATCTGCCGC TCGCGCTGAT GAAGCCGTGG
ACGGTGCCGC TGTTCGTCGT CGTCGCCGCC TTCGCGCCGC TCGCGCTCGT CTTCCGCTAT
GCGGTGCTCA CCCCCCTGTC CCTGCTGATC CCGCCGCTCC GCAAAGTCGT CGTCGAACGC
TATTCGGGCA TGATCATCAA CCCGCTGTTC CGCCGCAAGG CACCCGAAGG CGATTTCCGC
CGCATGTGGG CGTGGCAGGA GGGCGGCGCG TGGGCGTGGT CGACCCTGCT GATCGCCGCG
GGCGTGTTCG GCTGGGTGCC GCTGCGCGCG CTCGCCATCT TCGGCGCGAT TGCGGCGGCG
ACCTTGGTGC TCAACCAGAT CCGCACCCTC GTCGCGCATC TGTGGGAAAA TGACGGCGCG
GTGTTGACCG TGACCGGCCA GTTTCTCGAC AGCGTCAACG TGCCGCCGCC GGGCCTGCTT
CCCGAATTGT GGGCGCCGGT GGGGCTGCGC TATCACGCAC TCCACCATTT GCTGCCCGGC
CTCCCCTATC ATTCGCTCGC CGAGGCGCAC CGCCGACTGA AGGCCGCGCT GCCCGCCGAT
TCGCAATATC ATGGCGCGAA TTACGACAGT CTGCCGAAAC TGGTGGCGAA CTTGGTCGCG
GGTTCGGCGC GGGGCAAGGC GGCCTGA
|
|---|
| Protein sequence | MTTINPPADR VATPFAPSAP RTPKSAIADD MAMIRAASEL TRDLVQPSAR IYWADFLAST
VIGYAGIAAA ILAPSIVWML LAATIAVVAL YRAGSFIHEL THIRKNALPG FRFAWNLLVG
VPLLIPSFMY EGIHSLHHNR TRYGTVEDPE YLPLALMKPW TVPLFVVVAA FAPLALVFRY
AVLTPLSLLI PPLRKVVVER YSGMIINPLF RRKAPEGDFR RMWAWQEGGA WAWSTLLIAA
GVFGWVPLRA LAIFGAIAAA TLVLNQIRTL VAHLWENDGA VLTVTGQFLD SVNVPPPGLL
PELWAPVGLR YHALHHLLPG LPYHSLAEAH RRLKAALPAD SQYHGANYDS LPKLVANLVA
GSARGKAA
|
|---|
| |